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The map label for this gene is 41409802

Identifier: 41409802

GI number: 41409802

Start: 4120879

End: 4121331

Strand: Reverse

Name: 41409802

Synonym: MAP3704c

Alternate gene names: NA

Gene position: 4121331-4120879 (Counterclockwise)

Preceding gene: 41409803

Following gene: 41409799

Centisome position: 85.33

GC content: 69.09

Gene sequence:

>453_bases
ATGCCCCGCCGCGAAGAGCCGTCGCACGGGCTTCTCGACCCCGTGGCCAAGATGCTGCGGTTGCCCTTCGGCACACCGGA
ATTCATCGACCGGATCGTCACCGGGGGCGTCAACCAGGTAGGCCGGCGCACGTTGCGGATGCTGATCACCACGTGGGACG
CCGCCGGCGGCGGGCCGTTCGCGGCCAGCGCCATCGCGTCCACCGGGATGGCAAAGACCGCCGAGATCGTGCAGGGCATG
TTCATCGGCCCGGTCTTCGGCCCGCTGCTGAGAATCCTGGGCGCCGACAAGGTGGCCGTCCGGGCCTCGTTGTGCGCCTC
CCAGCTGGTGGGCCTGGGCATCATGCGCTACGGCATCCGCTCGGAGCCGCTGCATTCGATGTCGGTGGACGCCATCGTCG
ACGCGATCGGGCCGACTATGCAGCGCTACCTGGTCGGCGACATCACCCGGTGA

Upstream 100 bases:

>100_bases
CGGCACGCGTCCCGCCGAACGGGTCCGCACCAGCGCGCCCACGCGCCCGCCACGCGGCCGGTTCCTTGATCTTTGCCCCA
CGACCGGCGATCCTGACACC

Downstream 100 bases:

>100_bases
CCGCTCAGGCCGCCCGCGGCTGGTAGTCGCGGCCCACCTGAACGTAGCTGTCGGCGGTGATGCGCACCGGGTACACCGGC
ACCGAAACGCTCGGATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPRREEPSHGLLDPVAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPFAASAIASTGMAKTAEIVQGM
FIGPVFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIRSEPLHSMSVDAIVDAIGPTMQRYLVGDITR

Sequences:

>Translated_150_residues
MPRREEPSHGLLDPVAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPFAASAIASTGMAKTAEIVQGM
FIGPVFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIRSEPLHSMSVDAIVDAIGPTMQRYLVGDITR
>Mature_149_residues
PRREEPSHGLLDPVAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPFAASAIASTGMAKTAEIVQGMF
IGPVFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIRSEPLHSMSVDAIVDAIGPTMQRYLVGDITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15989; Mature: 15858

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRREEPSHGLLDPVAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPF
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH
AASAIASTGMAKTAEIVQGMFIGPVFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
SEPLHSMSVDAIVDAIGPTMQRYLVGDITR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRREEPSHGLLDPVAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPF
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH
AASAIASTGMAKTAEIVQGMFIGPVFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
SEPLHSMSVDAIVDAIGPTMQRYLVGDITR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA