| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabG
Identifier: 41409790
GI number: 41409790
Start: 4105943
End: 4107307
Strand: Reverse
Name: fabG
Synonym: MAP3692c
Alternate gene names: 41409790
Gene position: 4107307-4105943 (Counterclockwise)
Preceding gene: 41409792
Following gene: 41409789
Centisome position: 85.04
GC content: 70.99
Gene sequence:
>1365_bases GTGGCTCCGAAGGTCTCGTCCGATCTGTTCTCGCAGATTGTCAATTCCGGTCCTGGATCGTTTCTCGCCAAGCAGCTCGG CGTCCCGCAACCCGAGACGCTGCGCCGCTACCGGCCCGGTGACCCGCCGCTGGCCGGGTCGCTGCTGATCGGCGGCGAGG GCCGCGTGGTCGAGCCGCTGCGGGCGGCGCTGGCCAAGGACTACGACCTGGTCGGCAACAACCTGGGCGGGCGCTGGGCC GACCGGTTCGGCGGGCTGGTCTTCGACGCCACCGGGATCACCACCCCGGAGGGCCTGAAGGGGCTGTACGAGTTCTTCAC CCCACTGCTGCGCAACCTGGGTCACTGCGCCCGCGTGGTGGTGGTCGGCACCACGCCCGACGCCGCCGCCGGCCCGCACG AGCGGATCGCCCAGCGCGCCCTGGAGGGCTTCACCCGGTCATTGGGCAAGGAGCTGCGCAACGGCTCGACGGTGGCGCTG GTGTACCTGTCGCCGGCCGCCAAACCCGCCGCGACGGGCCTGGAGTCGACCATGCGGTTCATCCTGTCGGCCAAGTCCGC CTACGTCGACGGCCAGGTCTTCTACGTCGGCGAGGCCGACTCCACCCCCCCGGCGGACTGGGAACGGCCGCTGGACGGCA AGGTCGCCATCGTGACCGGTGCGGCCCGCGGAATCGGCGCCACGATCGCCGAGGTGTTCGCCCGCGACGGCGCCCGCGTG GTCGCGATCGACGTGGAATCGGCCGCCGAGACGCTGGCCGAGACGGCCAGCCGGGTCGGCGGCACCGCGCTGTGGCTCGA CGTCACCGCCCCCGACGCCGTCGACAAGATCACCGAGCACCTGCGCGAGCACCACGGCGGTCACGCCGACATCCTGGTCA ACAACGCCGGGATCACCCGCGACAAGCTGCTGGCCAACATGGACGACGCGCGCTGGGACGCCGTGTTGGCCGTGAATCTG CTTGCCCCACTTCGCCTTACCGAAGGGCTGGTGGGCAACGGCAGCATCGGCGAAGGCGGCCGCATCGTCGGCCTTTCGTC GATGGCCGGCATCGCGGGCAACCGCGGCCAGACCAACTACGCCACCACCAAGGCAGGCATGATCGGCCTCACCCAGGCGC TGGCGCCGGAGCTCTACGACAAGGGCATCACCATCAACGCCGTCGCGCCGGGATTCATCGAGACCCAGATGACGGCCGCC ATCCCGCTGGCCACCCGCGAGGTGGGGCGCCGGATGAACTCGCTGCTGCAGGGCGGGCAGCCGGTGGACGTCGCCGAAAC CATCGCCTACTTCGCCAGCCCGGCGTCGAACGCGGTGACCGGCAACGTCATCCGGGTCTGCGGCCAGGCGATGCTGGGGG CATGA
Upstream 100 bases:
>100_bases GCCATACTACCCACTGTTCTTACTCTGAAGTAAGTTCGTCCTCGATACGGTTGTCCTATAGGCATACCCCGACGCAGAAA CAACACGGAAGGTAGCTCCG
Downstream 100 bases:
>100_bases TGAACCAGCCGAGCGGCTTGAAGAACATGCTGCGCGCGGCCGCCGGGGCGCTGCCGGTGGTGTCCCGCGGCAGCGCGCTG CCCACCCGCACGGTCACCGT
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAPKVSSDLFSQIVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGEGRVVEPLRAALAKDYDLVGNNLGGRWA DRFGGLVFDATGITTPEGLKGLYEFFTPLLRNLGHCARVVVVGTTPDAAAGPHERIAQRALEGFTRSLGKELRNGSTVAL VYLSPAAKPAATGLESTMRFILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAARGIGATIAEVFARDGARV VAIDVESAAETLAETASRVGGTALWLDVTAPDAVDKITEHLREHHGGHADILVNNAGITRDKLLANMDDARWDAVLAVNL LAPLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNYATTKAGMIGLTQALAPELYDKGITINAVAPGFIETQMTAA IPLATREVGRRMNSLLQGGQPVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA
Sequences:
>Translated_454_residues MAPKVSSDLFSQIVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGEGRVVEPLRAALAKDYDLVGNNLGGRWA DRFGGLVFDATGITTPEGLKGLYEFFTPLLRNLGHCARVVVVGTTPDAAAGPHERIAQRALEGFTRSLGKELRNGSTVAL VYLSPAAKPAATGLESTMRFILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAARGIGATIAEVFARDGARV VAIDVESAAETLAETASRVGGTALWLDVTAPDAVDKITEHLREHHGGHADILVNNAGITRDKLLANMDDARWDAVLAVNL LAPLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNYATTKAGMIGLTQALAPELYDKGITINAVAPGFIETQMTAA IPLATREVGRRMNSLLQGGQPVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA >Mature_453_residues APKVSSDLFSQIVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGEGRVVEPLRAALAKDYDLVGNNLGGRWAD RFGGLVFDATGITTPEGLKGLYEFFTPLLRNLGHCARVVVVGTTPDAAAGPHERIAQRALEGFTRSLGKELRNGSTVALV YLSPAAKPAATGLESTMRFILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAARGIGATIAEVFARDGARVV AIDVESAAETLAETASRVGGTALWLDVTAPDAVDKITEHLREHHGGHADILVNNAGITRDKLLANMDDARWDAVLAVNLL APLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNYATTKAGMIGLTQALAPELYDKGITINAVAPGFIETQMTAAI PLATREVGRRMNSLLQGGQPVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=36.9230769230769, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=34.7280334728033, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=31.6, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=35.4166666666667, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=32.8358208955224, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI66933014, Length=239, Percent_Identity=30.1255230125523, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=29.4573643410853, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI40807363, Length=192, Percent_Identity=28.6458333333333, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=31.8181818181818, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4758504, Length=209, Percent_Identity=30.1435406698565, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=29.8804780876494, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=32.4324324324324, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI33667109, Length=199, Percent_Identity=31.6582914572864, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=28.8065843621399, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI20149619, Length=237, Percent_Identity=27.8481012658228, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI157739938, Length=243, Percent_Identity=25.5144032921811, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=28.1746031746032, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=40.650406504065, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI87082100, Length=247, Percent_Identity=35.6275303643725, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=30.4526748971193, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=31.7269076305221, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=32.7868852459016, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=33.469387755102, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=32.5301204819277, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=27.2030651340996, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=29.1828793774319, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=28.5140562248996, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=27.1653543307087, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1787526, Length=196, Percent_Identity=26.530612244898, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=39.8373983739837, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17555706, Length=241, Percent_Identity=39.0041493775934, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=31.7460317460317, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=36.2694300518135, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=31.7948717948718, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=32.3383084577114, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=32.6530612244898, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562908, Length=244, Percent_Identity=29.0983606557377, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=28.3636363636364, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.1787072243346, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=27.5193798449612, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17538182, Length=206, Percent_Identity=30.0970873786408, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560220, Length=247, Percent_Identity=29.5546558704453, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=29.3650793650794, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562906, Length=245, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17562904, Length=253, Percent_Identity=28.8537549407115, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508895, Length=205, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=28.4090909090909, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567345, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17560150, Length=242, Percent_Identity=28.9256198347107, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534694, Length=199, Percent_Identity=31.6582914572864, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17531453, Length=245, Percent_Identity=29.3877551020408, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17562990, Length=244, Percent_Identity=28.6885245901639, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560332, Length=255, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=214, Percent_Identity=30.8411214953271, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=39.7540983606557, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=34.297520661157, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI18859837, Length=196, Percent_Identity=33.6734693877551, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=30.7086614173228, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI21357041, Length=238, Percent_Identity=31.9327731092437, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644339, Length=242, Percent_Identity=32.6446280991736, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI28571526, Length=240, Percent_Identity=32.5, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355319, Length=200, Percent_Identity=32.5, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24644337, Length=240, Percent_Identity=30, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24643142, Length=196, Percent_Identity=34.1836734693878, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI21358495, Length=208, Percent_Identity=27.4038461538462, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640492, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581726, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24649181, Length=223, Percent_Identity=30.0448430493274, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=29.7142857142857, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 47268; Mature: 47137
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKVSSDLFSQIVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGEGRVVEPL CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHH RAALAKDYDLVGNNLGGRWADRFGGLVFDATGITTPEGLKGLYEFFTPLLRNLGHCARVV HHHHHCCHHHHCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE VVGTTPDAAAGPHERIAQRALEGFTRSLGKELRNGSTVALVYLSPAAKPAATGLESTMRF EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH ILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAARGIGATIAEVFARDGARV HHHHHHHEECCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEE VAIDVESAAETLAETASRVGGTALWLDVTAPDAVDKITEHLREHHGGHADILVNNAGITR EEEEHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCH DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNY HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCC ATTKAGMIGLTQALAPELYDKGITINAVAPGFIETQMTAAIPLATREVGRRMNSLLQGGQ CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure APKVSSDLFSQIVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGEGRVVEPL CCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHH RAALAKDYDLVGNNLGGRWADRFGGLVFDATGITTPEGLKGLYEFFTPLLRNLGHCARVV HHHHHCCHHHHCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE VVGTTPDAAAGPHERIAQRALEGFTRSLGKELRNGSTVALVYLSPAAKPAATGLESTMRF EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH ILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAARGIGATIAEVFARDGARV HHHHHHHEECCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEE VAIDVESAAETLAETASRVGGTALWLDVTAPDAVDKITEHLREHHGGHADILVNNAGITR EEEEHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCH DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNY HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCC ATTKAGMIGLTQALAPELYDKGITINAVAPGFIETQMTAAIPLATREVGRRMNSLLQGGQ CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC PVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]