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The map label for this gene is 41408685

Identifier: 41408685

GI number: 41408685

Start: 2911338

End: 2911742

Strand: Direct

Name: 41408685

Synonym: MAP2587

Alternate gene names: NA

Gene position: 2911338-2911742 (Clockwise)

Preceding gene: 41408684

Following gene: 41408686

Centisome position: 60.28

GC content: 65.68

Gene sequence:

>405_bases
ATGGCGGCCCGTCTGGCTCCGGCGATCACCGCAGACACCGAATTCTTCTGGAACGGGTTGCGGGAGAACAAACTCCTGAT
CCAACGCTGCAGCGGCTGCGGGCAGCTGCGTCACCCACCCCGCCCGATGTGCCCGCACTGCCGGTCGCTGGACTGGGAGG
CCGTCGAGTCGTCGGGCCGCGGCACCGTGTACAGCTACGTGATGCCGCACGAGCCGAAGTTTCCGTTTTTCGAGTACCCC
TACATCGTCGTGCTGGTGGAACTCGAGGAGGGGGTGCGGCTGGTGTCCAACCTGACCGGCATCGACCCGGCCGAGGTGAC
GCCCGGACTGCCGGTCGAGGTCTACTACCAAACCTTCGACGGCTCGCAAAACCTGGTGCTGCACCAGTTCCGGCCGAGCG
CATAG

Upstream 100 bases:

>100_bases
CCGGCTTCTTCCTGACCTGGCTGACGACCTACACCGACCAGAACGGCGAGGTGTTGGGGCGCCAGCGATTCCGGGTGCTG
CGCTTCAGGCCGGCCGGCTG

Downstream 100 bases:

>100_bases
GCCCGTCATGGACTTCTCGTTCACCGAAGAGCAGGAGACGATCGGCAAGCTGGCCCGCGATCTGTTCGAGCGCCGCGCCA
CCCCGGAACGGCTGACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAARLAPAITADTEFFWNGLRENKLLIQRCSGCGQLRHPPRPMCPHCRSLDWEAVESSGRGTVYSYVMPHEPKFPFFEYP
YIVVLVELEEGVRLVSNLTGIDPAEVTPGLPVEVYYQTFDGSQNLVLHQFRPSA

Sequences:

>Translated_134_residues
MAARLAPAITADTEFFWNGLRENKLLIQRCSGCGQLRHPPRPMCPHCRSLDWEAVESSGRGTVYSYVMPHEPKFPFFEYP
YIVVLVELEEGVRLVSNLTGIDPAEVTPGLPVEVYYQTFDGSQNLVLHQFRPSA
>Mature_133_residues
AARLAPAITADTEFFWNGLRENKLLIQRCSGCGQLRHPPRPMCPHCRSLDWEAVESSGRGTVYSYVMPHEPKFPFFEYPY
IVVLVELEEGVRLVSNLTGIDPAEVTPGLPVEVYYQTFDGSQNLVLHQFRPSA

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15155; Mature: 15024

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARLAPAITADTEFFWNGLRENKLLIQRCSGCGQLRHPPRPMCPHCRSLDWEAVESSGR
CCCCCCCCEECCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GTVYSYVMPHEPKFPFFEYPYIVVLVELEEGVRLVSNLTGIDPAEVTPGLPVEVYYQTFD
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCEEEEEEECC
GSQNLVLHQFRPSA
CCCCEEEEECCCCC
>Mature Secondary Structure 
AARLAPAITADTEFFWNGLRENKLLIQRCSGCGQLRHPPRPMCPHCRSLDWEAVESSGR
CCCCCCCEECCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GTVYSYVMPHEPKFPFFEYPYIVVLVELEEGVRLVSNLTGIDPAEVTPGLPVEVYYQTFD
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCEEEEEEECC
GSQNLVLHQFRPSA
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]