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The map label for this gene is embR_2

Identifier: 41408601

GI number: 41408601

Start: 2811625

End: 2812767

Strand: Direct

Name: embR_2

Synonym: MAP2503

Alternate gene names: 41408601

Gene position: 2811625-2812767 (Clockwise)

Preceding gene: 41408600

Following gene: 41408602

Centisome position: 58.21

GC content: 66.93

Gene sequence:

>1143_bases
ATGGCCAAGCGTCTCGAGTTCGGCCTGCTCGGACCGCTGGAGATGACCGTCGACGGCGACCTAGTGCCCCTGGGCACGCC
CAAGCAGCGCGCGGTGCTGGCCATGCTGCTGATGAACCGCAACAACCCCGTCGGCATCGATCGGCTGATCACCGGACTGT
GGGACGAGTCGCCGCCGTCGGGGGCGCGGGCCAGCCTCCACTCCTACGTATCCAACCTGCGCAAGCTGCTCAGCAACGCC
GGGGTCGACCCTCGCACGGTGCTGGTCGCGGCGCCGCCGGGCTACCGACTCAACATCCCCGACGACCGTTGCGATCTCGG
TCGGTTCATCACCGAGAAGACCGCCGGCGTGCAGGCGGCGGCCTCCGGCCGCTTCGAACAGGCCGGCGCGCACCTGGCGG
CCGCGTTGGCGCAGTGGCGCGGCCCGGTGCTCGAAGACCTGACGGAGTTCCGGTTCGTCGGCACCTTCGCCACCTCGCTG
GTGGAGGAGAAGATCCTGACCCACATCGCGCAAGCGGAAGCCGAAATAGCTTGTGGCCGTGCGTTTTCCGTAATCACGGA
ACTGGAATCGCTGACCCGCGAACATCCCTACCGCGAACAGCTGTGGGCGCAGTTGATGACGGCGTACTACCTCACCGACC
GTCAGTCCGACGCGTTGGCCGCGTATCGGCGCGTGCAGAAGTCACTCGCCGACGACCTGGGGATCGACCCGGGCCAGAAC
CTGCGCATGCTCAACGACCGGATCCTGCGCCAGGAACCGCTGGACGCCAAGAAGAATGCCATGACGACCGCCGCGGTCAC
CGTCACCGTGCTCGAGCACTACACCCTGGCGTCCGGCAGGAACGCCGGAGCCCTGCTGCACGACGCGGCCGGGCGGGCGT
TTCCGCTGCGCGGCTCGACGACGATCGGGCGCCTCGACGACAACGACATCGTCCTCGACTCTCCCAAGGTCAGCCGGCAC
CATGCCGTCATCGTCGACACCGGAACCAGCTACATCATCAACGACCTGCGATCCTCCAACGGCGTGCACGTGCAAGACCA
ACGAATCCACTCGGCCGCCGTCCTGCAGGACGGCGACCGCATCCGGATCTGCGAGCACGAATTCACTTTCCGGCTGGCCG
AAGAGAATCAGCACGCCGGTTAG

Upstream 100 bases:

>100_bases
GGGCCCTTCGGATTCGCAACGAATCGGGCCGCCGGGCGTCACAATCTCCCCTGTGACCTCCCTGCCCCCCGACCCCCCGC
ACGGCAGGTCGACCCCGATG

Downstream 100 bases:

>100_bases
CTCGGCACCGGGCGGCGGCAATTGTTGCCGTTATCGTGCGGCGCGACGGGCGGGCGCTTACCGTCACGTTGTCGGTCTCG
GGTCGAAAGGATGCGCGATG

Product: EmbR_2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAKRLEFGLLGPLEMTVDGDLVPLGTPKQRAVLAMLLMNRNNPVGIDRLITGLWDESPPSGARASLHSYVSNLRKLLSNA
GVDPRTVLVAAPPGYRLNIPDDRCDLGRFITEKTAGVQAAASGRFEQAGAHLAAALAQWRGPVLEDLTEFRFVGTFATSL
VEEKILTHIAQAEAEIACGRAFSVITELESLTREHPYREQLWAQLMTAYYLTDRQSDALAAYRRVQKSLADDLGIDPGQN
LRMLNDRILRQEPLDAKKNAMTTAAVTVTVLEHYTLASGRNAGALLHDAAGRAFPLRGSTTIGRLDDNDIVLDSPKVSRH
HAVIVDTGTSYIINDLRSSNGVHVQDQRIHSAAVLQDGDRIRICEHEFTFRLAEENQHAG

Sequences:

>Translated_380_residues
MAKRLEFGLLGPLEMTVDGDLVPLGTPKQRAVLAMLLMNRNNPVGIDRLITGLWDESPPSGARASLHSYVSNLRKLLSNA
GVDPRTVLVAAPPGYRLNIPDDRCDLGRFITEKTAGVQAAASGRFEQAGAHLAAALAQWRGPVLEDLTEFRFVGTFATSL
VEEKILTHIAQAEAEIACGRAFSVITELESLTREHPYREQLWAQLMTAYYLTDRQSDALAAYRRVQKSLADDLGIDPGQN
LRMLNDRILRQEPLDAKKNAMTTAAVTVTVLEHYTLASGRNAGALLHDAAGRAFPLRGSTTIGRLDDNDIVLDSPKVSRH
HAVIVDTGTSYIINDLRSSNGVHVQDQRIHSAAVLQDGDRIRICEHEFTFRLAEENQHAG
>Mature_379_residues
AKRLEFGLLGPLEMTVDGDLVPLGTPKQRAVLAMLLMNRNNPVGIDRLITGLWDESPPSGARASLHSYVSNLRKLLSNAG
VDPRTVLVAAPPGYRLNIPDDRCDLGRFITEKTAGVQAAASGRFEQAGAHLAAALAQWRGPVLEDLTEFRFVGTFATSLV
EEKILTHIAQAEAEIACGRAFSVITELESLTREHPYREQLWAQLMTAYYLTDRQSDALAAYRRVQKSLADDLGIDPGQNL
RMLNDRILRQEPLDAKKNAMTTAAVTVTVLEHYTLASGRNAGALLHDAAGRAFPLRGSTTIGRLDDNDIVLDSPKVSRHH
AVIVDTGTSYIINDLRSSNGVHVQDQRIHSAAVLQDGDRIRICEHEFTFRLAEENQHAG

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000253
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR008984
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00498 FHA; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 41685; Mature: 41554

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRLEFGLLGPLEMTVDGDLVPLGTPKQRAVLAMLLMNRNNPVGIDRLITGLWDESPPS
CCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
GARASLHSYVSNLRKLLSNAGVDPRTVLVAAPPGYRLNIPDDRCDLGRFITEKTAGVQAA
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHCCCHHH
ASGRFEQAGAHLAAALAQWRGPVLEDLTEFRFVGTFATSLVEEKILTHIAQAEAEIACGR
HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSVITELESLTREHPYREQLWAQLMTAYYLTDRQSDALAAYRRVQKSLADDLGIDPGQN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
LRMLNDRILRQEPLDAKKNAMTTAAVTVTVLEHYTLASGRNAGALLHDAAGRAFPLRGST
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCC
TIGRLDDNDIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSAAVLQDGDR
EECCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCE
IRICEHEFTFRLAEENQHAG
EEEECCEEEEEECCCCCCCC
>Mature Secondary Structure 
AKRLEFGLLGPLEMTVDGDLVPLGTPKQRAVLAMLLMNRNNPVGIDRLITGLWDESPPS
CCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
GARASLHSYVSNLRKLLSNAGVDPRTVLVAAPPGYRLNIPDDRCDLGRFITEKTAGVQAA
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHCCCHHH
ASGRFEQAGAHLAAALAQWRGPVLEDLTEFRFVGTFATSLVEEKILTHIAQAEAEIACGR
HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSVITELESLTREHPYREQLWAQLMTAYYLTDRQSDALAAYRRVQKSLADDLGIDPGQN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
LRMLNDRILRQEPLDAKKNAMTTAAVTVTVLEHYTLASGRNAGALLHDAAGRAFPLRGST
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCC
TIGRLDDNDIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSAAVLQDGDR
EECCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCE
IRICEHEFTFRLAEENQHAG
EEEECCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]