| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408584
Identifier: 41408584
GI number: 41408584
Start: 2790373
End: 2790819
Strand: Direct
Name: 41408584
Synonym: MAP2486
Alternate gene names: NA
Gene position: 2790373-2790819 (Clockwise)
Preceding gene: 41408580
Following gene: 41408586
Centisome position: 57.77
GC content: 71.59
Gene sequence:
>447_bases ATGACTTCTTCCACTTCTTCCGCTTCCGAATCGGCCGCCGCCCCGAGCGGTCGCGACGTGATCGCCCAGTTCCTGCCCCA GTCGCCGTTCGTCGTCAAGCTCGGCATCGTGGCCGAGCGGCTGGACGAGGACGAGGTCCGGCTGCGGCTGCCCTGGGATC CCTCCAACGTGACGATCGGCGACATGGTGCACGGCGGCGCCATCGCCACGCTGGCCGATCTCACCGTGATGGCGGCGGCG TGGTGCGGCGCCCAGGCGCCGCCGCAGCTGCGGGGGGTGACTGTGTCGATGGCCCTGGACTTCATGGCCCCGGCCCGGGC CAGCGACGTGATCGGGGTCGGCCGGGTGCTGCGGCGGGGCCGGTCGCTGGTCAACTGCGAGGCCGAGATCGTCGACCCGC AGGGCACGCTGGTGGCCAAGGCGCTGGCCACCTACAAGGTGGGGTGA
Upstream 100 bases:
>100_bases CCGGCGCCGGCGCTGTCAACTCCGGCGCGGGCGGCGTCACCGTCACGCCGGAGTGGGCGCGGTGCTTTGCCGACGGGGCG CGGTGCGAAAACATGGGCGG
Downstream 100 bases:
>100_bases GCCGGCCGGCGCTCGAGTTGTGTCGGCCGGCGCTCAAGTTGTCGGCCGAGCGTGCACCCACGGTGACGTTCGGGCCGTTT TTTCGCGCTGACTACACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTSSTSSASESAAAPSGRDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVMAAA WCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRGRSLVNCEAEIVDPQGTLVAKALATYKVG
Sequences:
>Translated_148_residues MTSSTSSASESAAAPSGRDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVMAAA WCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRGRSLVNCEAEIVDPQGTLVAKALATYKVG >Mature_147_residues TSSTSSASESAAAPSGRDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVMAAAW CGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRGRSLVNCEAEIVDPQGTLVAKALATYKVG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15432; Mature: 15301
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTSSASESAAAPSGRDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIG CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECHHHHHCCCCCEEEECCCCCCCEEEC DMVHGGAIATLADLTVMAAAWCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRG CEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCEEHHHHHHHHCCCCCCHHHHHHHHHHCC RSLVNCEAEIVDPQGTLVAKALATYKVG CCEECCEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure TSSTSSASESAAAPSGRDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIG CCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECHHHHHCCCCCEEEECCCCCCCEEEC DMVHGGAIATLADLTVMAAAWCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRG CEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCEEHHHHHHHHCCCCCCHHHHHHHHHHCC RSLVNCEAEIVDPQGTLVAKALATYKVG CCEECCEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA