| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408580
Identifier: 41408580
GI number: 41408580
Start: 2786480
End: 2786875
Strand: Direct
Name: 41408580
Synonym: MAP2482
Alternate gene names: NA
Gene position: 2786480-2786875 (Clockwise)
Preceding gene: 41408577
Following gene: 41408584
Centisome position: 57.69
GC content: 67.17
Gene sequence:
>396_bases ATGACCATCAGTTTCAACCACACCATCGTCGCCTCACGCGACAAACGGGAATCCGCGGAGTTTCTCGCCGAGTTGTTCGA CCTGCCCGGCCCAAAGCCGTTCGGCCACTTCATGGTCGTCGAACTCGACCACGGCGCCAGCCTGGACTACGCGGACGCCC CCGACGGCGCGGACATCCCGCGCCAGCACTACGCGTTCTTGGTCTCCGAGCAAGAGTTCGACACCATCTACGGCAAGATC CGCGCCCGCGGCCTGGAACACTGGGCCGACCCCGGCGCCCGGCGTCCCGGCGAGATCAACCACAACGACGGCGGGCGCGG GGTGTACTTCCTGGATCCCTCCGGCCACGCCATGGAGATCCTCACCCGCCCGTACGGGTCGGGCGCGGCGAACTAG
Upstream 100 bases:
>100_bases GTTCCGCGATCCCGACAACATCGCCCTGGAGCTGACCGCCCCGAAGTAGCCGCCCGGCGCGTTGTCGCCGCGGCCGCGCG GTGGTTGACTGGACAGAACC
Downstream 100 bases:
>100_bases TCGCCGGTGCGCGCGGTGCCGTGCCGCTGGCTTTCCTGCTTGCGGTAGTCGTCGGCCAGCTGCGCGACATGCTTGGGAAG GCTTCCGGTGGCGACGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine Transferase; Glyoxalase; Glyoxalase Family Protein; Metallothiol Transferase FosB; Fosfomycin Resistance Protein; Glyoxalase Family Protein Superfamily; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Glyoxalase/Bleomycin Resistance Protein; Gamma-Glutamyltranspeptidase; Lactoylglutathione Lyase; Aromatic Ring-Opening Dioxygenase; Ring-Cleavage Extradiol Dioxygenase
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTISFNHTIVASRDKRESAEFLAELFDLPGPKPFGHFMVVELDHGASLDYADAPDGADIPRQHYAFLVSEQEFDTIYGKI RARGLEHWADPGARRPGEINHNDGGRGVYFLDPSGHAMEILTRPYGSGAAN
Sequences:
>Translated_131_residues MTISFNHTIVASRDKRESAEFLAELFDLPGPKPFGHFMVVELDHGASLDYADAPDGADIPRQHYAFLVSEQEFDTIYGKI RARGLEHWADPGARRPGEINHNDGGRGVYFLDPSGHAMEILTRPYGSGAAN >Mature_130_residues TISFNHTIVASRDKRESAEFLAELFDLPGPKPFGHFMVVELDHGASLDYADAPDGADIPRQHYAFLVSEQEFDTIYGKIR ARGLEHWADPGARRPGEINHNDGGRGVYFLDPSGHAMEILTRPYGSGAAN
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14470; Mature: 14339
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISFNHTIVASRDKRESAEFLAELFDLPGPKPFGHFMVVELDHGASLDYADAPDGADIP CEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RQHYAFLVSEQEFDTIYGKIRARGLEHWADPGARRPGEINHNDGGRGVYFLDPSGHAMEI CCCEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE LTRPYGSGAAN EECCCCCCCCC >Mature Secondary Structure TISFNHTIVASRDKRESAEFLAELFDLPGPKPFGHFMVVELDHGASLDYADAPDGADIP EEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RQHYAFLVSEQEFDTIYGKIRARGLEHWADPGARRPGEINHNDGGRGVYFLDPSGHAMEI CCCEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE LTRPYGSGAAN EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA