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The map label for this gene is glgB

Identifier: 41408532

GI number: 41408532

Start: 2733004

End: 2735199

Strand: Direct

Name: glgB

Synonym: MAP2434

Alternate gene names: 41408532

Gene position: 2733004-2735199 (Clockwise)

Preceding gene: 41408531

Following gene: 41408535

Centisome position: 56.59

GC content: 67.53

Gene sequence:

>2196_bases
ATGAGCCACGCCGATCAACTCGCTCGGACGCACCTGGCGCCCGATCCTGCGGACCTGTCGCGCCTGGTCGCCGGCACCCA
CCACGACCCGCACGGAATTCTGGGGGCCCACGAATACGGCGATCACACCGTCATCCGGGCGTTCCGGCCGCACGCGACCG
AGGTCGCCGCGCTGGTCGGCGGCGACCGGTTCGCGATGCAGCACATCGAATCCGGCCTTTTCGCGGTGGCCCTGCCCTTC
ACGAACCTGATCGACTACCGGCTACAGATCACCTACCCCGACTCCGAGCCCTACGTCGTCGCCGACGCCTACCGCTTCCT
GCCCACCCTGGGCGAGGTCGACCTGCACCTGTTCGGCGAGGGGCGCCACGAGCGGCTCTGGGAAGTCCTTGGCGCGCATC
CCCGCTCGTTCACCACGGCCGACGGCGTCGTCACCGGGGTGTCGTTCGCGGTGTGGGCGCCCAACGCCAAGGGCATCAGT
TTGATCGGTGAGTTCAACGGCTGGACCGGTACCGAAGCCCCGATGCGGGTGTTGGGCTCGTCGGGCGTGTGGGAGCTGTT
CTGGCCCGACTTCCCGATCGGCGGGCTGTACAAGTTCAAGGTGCACGGCGCCGACGGCGTGGTCACCGAGCGGGCCGATC
CGATGGCGTTCGCCACCGAGGTGCCCCCGCACACCGCCTCCCGGGTGACGCTCAGCAGCTACACCTGGGGAGACGCCGAC
TGGATGACCCAGCGCGCCGCGCGTAACCCGGTCTTCGAGCCGATGAGCACCTACGAGGTCCACCTGGGCTCCTGGCGTCC
CGGGCTCAGCTACCGCCAATTGGCCCGCGAGCTGACGGACTACGTGGTGGAGCACGGCTTCACCCACGTGGAGCTGCTGC
CGGTCGCCGAGCATCCGTTCGCCGGCTCCTGGGGATACCAGGTGACGTCGTACTACGCGCCGACCTCCCGATTCGGCACG
CCCGACGAGTTCCGGGCGCTGGTCGACGCCCTGCACCAGGCCGGTATCGGTGTGATCGTCGACTGGGTGCCGGCACACTT
CCCGAAGGACGCGTGGGCGCTGGGACGGTTCGACGGCACCCCGCTCTACGAACACTCCGACCCCAAGCGTGGGGAGCAAC
TCGACTGGGGCACTTACGTATTCGACTTCGGCCGTCGGGAGGTGCGTAACTTCCTGGTGGCCAACGCGTTGTACTGGCTG
CAGGAGTTCCACATCGACGGGTTGCGGGTGGACGCGGTGGCCTCGATGCTGTACCTGGACTACTCCCGCCCCGAGGGCGG
CTGGACCCCCAACATCTACGGCGGCCGGGAGAACCTGGAGGCCGTCCAGTTCCTGCAGGAGATGAACGCCACCGCGCACA
AGTCCGCGCCCGGCATCGTCACCATCGCCGAGGAGTCGACCTCGTGGCCCGGCGTGACCAGGCCGACAAACCTTGGCGGA
CTTGGATTTTCGATGAAGTGGAACATGGGCTGGATGCACGACACGCTGGACTACATCAGCCGTGACCCGATCTATCGCAG
CTACCACCACCACGAGATGACGTTCTCGATGCTCTACGCATTCAGCGAGAACTACGTGCTGCCGCTCAGCCACGACGAGG
TGGTGCACGGCAAGGGCACCCTGTGGGGCCGGATGCCGGGCAACAATCACGTCAAAGCCGCCGGGCTGCGCAGCCTGCTG
GCCTACCAGTGGGCGCACCCCGGTAAGCAATTGTTGTTCATGGGCCAGGAATTCGGGCAGCGCGCCGAGTGGTCCGAAGA
ACGCGGCCTGGACTGGTGGCAGCTCGACGAGCAGGGCTTCTCCAACGGGATCCTGCGTCTGGTGCGCGACATCAACGACA
TCTATCGCAGCCACCCGGCGCTGTGGAGCCAGGACACCGTGCCCGACGGCTACTCCTGGATCGACGCCAACGACTCGGCC
AACAACGTGCTGAGCTTCCTGCGCTACGGCAAGGACGGCTCGGTGATGGCGTGCGTCTTCAACTTCGCCGGCGCCGAGCA
CAGCGGCTACCGGCTGGGATTGCCGTCGGCCGGCCGCTGGCGCGAGGTGCTCAACACCGACGCGACGGTCTACAACGGCT
CGGGCATCGGCAACATGGGCGGCGTCGACGCCACCGAGGACCCCTGGCACGGTCGGCCCGCCTCGGCGGTGCTGGTGCTG
CCGCCGACGTCGGCGCTGTGGCTGGAACCCAAGTAG

Upstream 100 bases:

>100_bases
GCTCACGTCATCAACATGCCGCTCATCCCCGATGAGGCTCGAATGACCTTGCTACGCAGGCGCTGAACGCACGACGAAAC
GGACCGGAGGTGAAAGGGAC

Downstream 100 bases:

>100_bases
CCCGCAACCACTTTCGCGAGCGCGCTTAATACAGCGCGTTGGCCAGGTTGCGCCGTCCGGCCACGACCTCGGGGTCGGCC
GGATCGAAAAGGTCGAACAG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MSHADQLARTHLAPDPADLSRLVAGTHHDPHGILGAHEYGDHTVIRAFRPHATEVAALVGGDRFAMQHIESGLFAVALPF
TNLIDYRLQITYPDSEPYVVADAYRFLPTLGEVDLHLFGEGRHERLWEVLGAHPRSFTTADGVVTGVSFAVWAPNAKGIS
LIGEFNGWTGTEAPMRVLGSSGVWELFWPDFPIGGLYKFKVHGADGVVTERADPMAFATEVPPHTASRVTLSSYTWGDAD
WMTQRAARNPVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGT
PDEFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRREVRNFLVANALYWL
QEFHIDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGG
LGFSMKWNMGWMHDTLDYISRDPIYRSYHHHEMTFSMLYAFSENYVLPLSHDEVVHGKGTLWGRMPGNNHVKAAGLRSLL
AYQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGFSNGILRLVRDINDIYRSHPALWSQDTVPDGYSWIDANDSA
NNVLSFLRYGKDGSVMACVFNFAGAEHSGYRLGLPSAGRWREVLNTDATVYNGSGIGNMGGVDATEDPWHGRPASAVLVL
PPTSALWLEPK

Sequences:

>Translated_731_residues
MSHADQLARTHLAPDPADLSRLVAGTHHDPHGILGAHEYGDHTVIRAFRPHATEVAALVGGDRFAMQHIESGLFAVALPF
TNLIDYRLQITYPDSEPYVVADAYRFLPTLGEVDLHLFGEGRHERLWEVLGAHPRSFTTADGVVTGVSFAVWAPNAKGIS
LIGEFNGWTGTEAPMRVLGSSGVWELFWPDFPIGGLYKFKVHGADGVVTERADPMAFATEVPPHTASRVTLSSYTWGDAD
WMTQRAARNPVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGT
PDEFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRREVRNFLVANALYWL
QEFHIDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGG
LGFSMKWNMGWMHDTLDYISRDPIYRSYHHHEMTFSMLYAFSENYVLPLSHDEVVHGKGTLWGRMPGNNHVKAAGLRSLL
AYQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGFSNGILRLVRDINDIYRSHPALWSQDTVPDGYSWIDANDSA
NNVLSFLRYGKDGSVMACVFNFAGAEHSGYRLGLPSAGRWREVLNTDATVYNGSGIGNMGGVDATEDPWHGRPASAVLVL
PPTSALWLEPK
>Mature_730_residues
SHADQLARTHLAPDPADLSRLVAGTHHDPHGILGAHEYGDHTVIRAFRPHATEVAALVGGDRFAMQHIESGLFAVALPFT
NLIDYRLQITYPDSEPYVVADAYRFLPTLGEVDLHLFGEGRHERLWEVLGAHPRSFTTADGVVTGVSFAVWAPNAKGISL
IGEFNGWTGTEAPMRVLGSSGVWELFWPDFPIGGLYKFKVHGADGVVTERADPMAFATEVPPHTASRVTLSSYTWGDADW
MTQRAARNPVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTP
DEFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRREVRNFLVANALYWLQ
EFHIDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGGL
GFSMKWNMGWMHDTLDYISRDPIYRSYHHHEMTFSMLYAFSENYVLPLSHDEVVHGKGTLWGRMPGNNHVKAAGLRSLLA
YQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGFSNGILRLVRDINDIYRSHPALWSQDTVPDGYSWIDANDSAN
NVLSFLRYGKDGSVMACVFNFAGAEHSGYRLGLPSAGRWREVLNTDATVYNGSGIGNMGGVDATEDPWHGRPASAVLVLP
PTSALWLEPK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=692, Percent_Identity=27.4566473988439, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI1789839, Length=725, Percent_Identity=48.2758620689655, Blast_Score=662, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=637, Percent_Identity=25.5886970172684, Blast_Score=164, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32564391, Length=545, Percent_Identity=24.954128440367, Blast_Score=150, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6320826, Length=638, Percent_Identity=25.705329153605, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28573410, Length=602, Percent_Identity=27.5747508305648, Blast_Score=176, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_MYCPA (Q73X75)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_961368.1
- ProteinModelPortal:   Q73X75
- SMR:   Q73X75
- EnsemblBacteria:   EBMYCT00000036900
- GeneID:   2720716
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP2434
- NMPDR:   fig|262316.1.peg.2434
- GeneTree:   EBGT00050000016657
- HOGENOM:   HBG287139
- OMA:   DGTCLYE
- ProtClustDB:   PRK05402
- BRENDA:   2.4.1.18
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 81660; Mature: 81529

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: ACT_SITE 306-306 ACT_SITE 341-341 ACT_SITE 346-346 ACT_SITE 409-409 ACT_SITE 411-411 ACT_SITE 464-464 ACT_SITE 531-531 ACT_SITE 532-532

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHADQLARTHLAPDPADLSRLVAGTHHDPHGILGAHEYGDHTVIRAFRPHATEVAALVG
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHC
GDRFAMQHIESGLFAVALPFTNLIDYRLQITYPDSEPYVVADAYRFLPTLGEVDLHLFGE
CCHHHHHHHHCCCEEEEECHHCEEEEEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEECC
GRHERLWEVLGAHPRSFTTADGVVTGVSFAVWAPNAKGISLIGEFNGWTGTEAPMRVLGS
CHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHCC
SGVWELFWPDFPIGGLYKFKVHGADGVVTERADPMAFATEVPPHTASRVTLSSYTWGDAD
CCEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCCCCEEEEECCCCCCHH
WMTQRAARNPVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAEHPF
HHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
AGSWGYQVTSYYAPTSRFGTPDEFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGT
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCCCCC
PLYEHSDPKRGEQLDWGTYVFDFGRREVRNFLVANALYWLQEFHIDGLRVDAVASMLYLD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEE
YSRPEGGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
LGFSMKWNMGWMHDTLDYISRDPIYRSYHHHEMTFSMLYAFSENYVLPLSHDEVVHGKGT
CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCE
LWGRMPGNNHVKAAGLRSLLAYQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGF
EEEECCCCCCEEHHHHHHHHHHHHCCCCHHEEEECHHHCCCCCCCHHHCCCEEECCHHHH
SNGILRLVRDINDIYRSHPALWSQDTVPDGYSWIDANDSANNVLSFLRYGKDGSVMACVF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEE
NFAGAEHSGYRLGLPSAGRWREVLNTDATVYNGSGIGNMGGVDATEDPWHGRPASAVLVL
ECCCCCCCCEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
PPTSALWLEPK
CCCCCEEECCC
>Mature Secondary Structure 
SHADQLARTHLAPDPADLSRLVAGTHHDPHGILGAHEYGDHTVIRAFRPHATEVAALVG
CHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHC
GDRFAMQHIESGLFAVALPFTNLIDYRLQITYPDSEPYVVADAYRFLPTLGEVDLHLFGE
CCHHHHHHHHCCCEEEEECHHCEEEEEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEECC
GRHERLWEVLGAHPRSFTTADGVVTGVSFAVWAPNAKGISLIGEFNGWTGTEAPMRVLGS
CHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHCC
SGVWELFWPDFPIGGLYKFKVHGADGVVTERADPMAFATEVPPHTASRVTLSSYTWGDAD
CCEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCCCCEEEEECCCCCCHH
WMTQRAARNPVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAEHPF
HHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
AGSWGYQVTSYYAPTSRFGTPDEFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGT
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCCCCC
PLYEHSDPKRGEQLDWGTYVFDFGRREVRNFLVANALYWLQEFHIDGLRVDAVASMLYLD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEE
YSRPEGGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
LGFSMKWNMGWMHDTLDYISRDPIYRSYHHHEMTFSMLYAFSENYVLPLSHDEVVHGKGT
CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCE
LWGRMPGNNHVKAAGLRSLLAYQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGF
EEEECCCCCCEEHHHHHHHHHHHHCCCCHHEEEECHHHCCCCCCCHHHCCCEEECCHHHH
SNGILRLVRDINDIYRSHPALWSQDTVPDGYSWIDANDSANNVLSFLRYGKDGSVMACVF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEE
NFAGAEHSGYRLGLPSAGRWREVLNTDATVYNGSGIGNMGGVDATEDPWHGRPASAVLVL
ECCCCCCCCEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
PPTSALWLEPK
CCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA