| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is glgE [H]
Identifier: 41408531
GI number: 41408531
Start: 2730831
End: 2732969
Strand: Direct
Name: glgE [H]
Synonym: MAP2433
Alternate gene names: 41408531
Gene position: 2730831-2732969 (Clockwise)
Preceding gene: 41408529
Following gene: 41408532
Centisome position: 56.54
GC content: 68.12
Gene sequence:
>2139_bases TTGCGAACCGCCAGGCGGGCGCGAAGGACCCGGGCAGATCGGAACGGAGTGTTGGTGCCCGGTCGTGTCGAGATCGATAA CGTCCAGCCGGTCGTCTCCTGTGGGACATATCCCGCCAAGGCCGTCGTCGGCGAGGTGGTGCCGGTCAGCGCCTCGGTGT GGCGCGAGGGACACGAGGCGGTGGCCGCGACGCTGGTGGTGCGCTACCTGGGACCGGCCTATCCGCCGGTGACCGAGACG CGCCGGGTCAAGGCGGTGCAGGCACCGGTCGCCGACCGCGAGGGCAGGGTCGACCAGCAACGGATCAAGCCGCTGTCGCT GCCGATGACGATGGGCCCCGAACCCTACGTCTTCCACGGTCAGTTCACCCCCGACCAGGTCGGATTATGGACCTTCCGGG TGGACGGCTGGGGCGACCCGATCCACTCCTGGCGGCACGGGCTGGTCGCCAAGCTGGACGCCGGCCAGGGCGAGACGGAG CTGTCCAACGATCTGCTGGTCGGCGCGGAGCTGTTCGAGCGCGCCGCCACGGGTGTGCCGCGCGCCCGGCGCGAACCGCT GCTGGCCGCCGCGGCCGCGCTGCGCACCGCCGGGGACCCGGTCACCCGGACGGCGCTGGCGCTGGCGCCGGAAATCGAGG AGATCCTGGCGGAGTATCCGCTGCGCGATCTGCTGACCCGCGGCGAGCAGTACGGGGTCTGGGTGGATCGGCCGCTGGCC CGCTTCGGCTCCTGGTATGAGATGTTCCCCCGCTCGACCGGCGGCTGGGACGACGACGGCAACCCCGTGCACGGCACCTT CGCGACGGCGGCCGCGGCGCTGCCGCGCATCGCGGCGATGGGCTTCGACGTCGTCTACCTGCCGCCGATCCATCCCATCG GGAAGGTACATCGCAAGGGGCGCAACAACTCTCCCACCGCCGGCCCGACGGATGTGGGCTCGCCGTGGGCGATCGGCAGC GACGAGGGCGGCCACGACGCCGTCCACCCGGATCTGGGCACCATCGAGGATTTCGACGCGTTCGTCGCCCGGGCCCGCGA ACTGGGCATGGAGGTGGCGCTCGACCTGGCGCTGCAATGCGCGCCGGATCATCCGTGGGCGCGCGAGCACCGCAACTGGT TCACCGAATTGCCGGACGGCACCATCGCGTACGCGGAGAACCCGCCCAAGAAGTACCAGGACATCTATCCGCTCAACTTC GACAACGACCCGGCCGGTCTCTATGACGAGGTGCTGCGGGTGGTCCGGCACTGGATCGACCACGGCGTCAAGTTCTTTCG CGTCGACAACCCGCACACCAAACCGCCGGACTTCTGGGCCTGGCTGATCGCCGCGGTCAAGGGCATCGATCCCGATGTGC TGTTCCTGTCCGAGGCCTTCACCCCGCCGGTCCGGCAAAACGGGCTGACCAAACTGGGCTTCACCCAGTCCTATACGTAC TTCACCTGGCGCACCGCGAAGTGGGAGCTGACCGAGTTCGGCAACGACATCGCCGCGCTGGCCGATTTCCGCCGGCCCAA CCTGTTCGTCAACACACCCGACATCCTGCACGCCATCCTGCAGCACAACGGTCCGGGGATGTTCGCCATCCGCGCGGTGC TGGCCGCCACGATGGGTCCGGCCTGGGGGGTGTACTCGGGCTACGAACTGTTCGAGCACCGCGCGGTGCGCGAGGGCAGC GAGGAGTACCTGAACTCCGAGAAGTACGAACTGCGGCCCCGCGATTTCGCCGGCGCGCTCGCCGAGGGAAGGTCGCTCGA GCCATTCATCACGCAGCTCAACACGATTCGGCGGCTCCACCCCGCGCTGCAACAGCTGCGCACCATCCATTTCCACGGCG TGGACAACGACGCGCTGCTCGCCTACAGCAAGTTCGACCCGGCCACCGGCGACTGCGTGCTGGTGGTGGTGACGCTCAAC GCATTCGGCCCCGAGGAAGCGACGCTGTTTTTAGACATGGCGGCATTGGGTATGGAGCCTTACGAGCGCTTTTGGGTGCG CGACGAGATCACCGGCCAGGAATTCCAGTGGGGGCAAGCCAATTACGTTCGCATCGACCCGGCACAGGCGGTCGCTCACG TCATCAACATGCCGCTCATCCCCGATGAGGCTCGAATGACCTTGCTACGCAGGCGCTGA
Upstream 100 bases:
>100_bases ACCCAGAAAGTTCCCCACCACAGGAAGTTTCCCGACGAGCGGCATTCCGCACGGAGCACACCGCGGGTGGGCCGCCCACA ATCGGAAACCCCGGTGCCGA
Downstream 100 bases:
>100_bases ACGCACGACGAAACGGACCGGAGGTGAAAGGGACATGAGCCACGCCGATCAACTCGCTCGGACGCACCTGGCGCCCGATC CTGCGGACCTGTCGCGCCTG
Product: hypothetical protein
Products: D-Glucose 6-phosphate; D-Glucose [C]
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MRTARRARRTRADRNGVLVPGRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEAVAATLVVRYLGPAYPPVTET RRVKAVQAPVADREGRVDQQRIKPLSLPMTMGPEPYVFHGQFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETE LSNDLLVGAELFERAATGVPRARREPLLAAAAALRTAGDPVTRTALALAPEIEEILAEYPLRDLLTRGEQYGVWVDRPLA RFGSWYEMFPRSTGGWDDDGNPVHGTFATAAAALPRIAAMGFDVVYLPPIHPIGKVHRKGRNNSPTAGPTDVGSPWAIGS DEGGHDAVHPDLGTIEDFDAFVARARELGMEVALDLALQCAPDHPWAREHRNWFTELPDGTIAYAENPPKKYQDIYPLNF DNDPAGLYDEVLRVVRHWIDHGVKFFRVDNPHTKPPDFWAWLIAAVKGIDPDVLFLSEAFTPPVRQNGLTKLGFTQSYTY FTWRTAKWELTEFGNDIAALADFRRPNLFVNTPDILHAILQHNGPGMFAIRAVLAATMGPAWGVYSGYELFEHRAVREGS EEYLNSEKYELRPRDFAGALAEGRSLEPFITQLNTIRRLHPALQQLRTIHFHGVDNDALLAYSKFDPATGDCVLVVVTLN AFGPEEATLFLDMAALGMEPYERFWVRDEITGQEFQWGQANYVRIDPAQAVAHVINMPLIPDEARMTLLRRR
Sequences:
>Translated_712_residues MRTARRARRTRADRNGVLVPGRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEAVAATLVVRYLGPAYPPVTET RRVKAVQAPVADREGRVDQQRIKPLSLPMTMGPEPYVFHGQFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETE LSNDLLVGAELFERAATGVPRARREPLLAAAAALRTAGDPVTRTALALAPEIEEILAEYPLRDLLTRGEQYGVWVDRPLA RFGSWYEMFPRSTGGWDDDGNPVHGTFATAAAALPRIAAMGFDVVYLPPIHPIGKVHRKGRNNSPTAGPTDVGSPWAIGS DEGGHDAVHPDLGTIEDFDAFVARARELGMEVALDLALQCAPDHPWAREHRNWFTELPDGTIAYAENPPKKYQDIYPLNF DNDPAGLYDEVLRVVRHWIDHGVKFFRVDNPHTKPPDFWAWLIAAVKGIDPDVLFLSEAFTPPVRQNGLTKLGFTQSYTY FTWRTAKWELTEFGNDIAALADFRRPNLFVNTPDILHAILQHNGPGMFAIRAVLAATMGPAWGVYSGYELFEHRAVREGS EEYLNSEKYELRPRDFAGALAEGRSLEPFITQLNTIRRLHPALQQLRTIHFHGVDNDALLAYSKFDPATGDCVLVVVTLN AFGPEEATLFLDMAALGMEPYERFWVRDEITGQEFQWGQANYVRIDPAQAVAHVINMPLIPDEARMTLLRRR >Mature_712_residues MRTARRARRTRADRNGVLVPGRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEAVAATLVVRYLGPAYPPVTET RRVKAVQAPVADREGRVDQQRIKPLSLPMTMGPEPYVFHGQFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETE LSNDLLVGAELFERAATGVPRARREPLLAAAAALRTAGDPVTRTALALAPEIEEILAEYPLRDLLTRGEQYGVWVDRPLA RFGSWYEMFPRSTGGWDDDGNPVHGTFATAAAALPRIAAMGFDVVYLPPIHPIGKVHRKGRNNSPTAGPTDVGSPWAIGS DEGGHDAVHPDLGTIEDFDAFVARARELGMEVALDLALQCAPDHPWAREHRNWFTELPDGTIAYAENPPKKYQDIYPLNF DNDPAGLYDEVLRVVRHWIDHGVKFFRVDNPHTKPPDFWAWLIAAVKGIDPDVLFLSEAFTPPVRQNGLTKLGFTQSYTY FTWRTAKWELTEFGNDIAALADFRRPNLFVNTPDILHAILQHNGPGMFAIRAVLAATMGPAWGVYSGYELFEHRAVREGS EEYLNSEKYELRPRDFAGALAEGRSLEPFITQLNTIRRLHPALQQLRTIHFHGVDNDALLAYSKFDPATGDCVLVVVTLN AFGPEEATLFLDMAALGMEPYERFWVRDEITGQEFQWGQANYVRIDPAQAVAHVINMPLIPDEARMTLLRRR
Specific function: Could be involved in glycogen catabolism [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021828 - InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]
EC number: 3.2.1.93 [C]
Molecular weight: Translated: 79354; Mature: 79354
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTARRARRTRADRNGVLVPGRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEA CCCHHHHHHHHCCCCCEEECCEEEECCCCHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH VAATLVVRYLGPAYPPVTETRRVKAVQAPVADREGRVDQQRIKPLSLPMTMGPEPYVFHG HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC QFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETELSNDLLVGAELFERAATGVP CCCCCCCEEEEEEECCCCCHHHHHHCCCEEEECCCCCCCHHCCCEEEHHHHHHHHHCCCC RARREPLLAAAAALRTAGDPVTRTALALAPEIEEILAEYPLRDLLTRGEQYGVWVDRPLA CHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCHHH RFGSWYEMFPRSTGGWDDDGNPVHGTFATAAAALPRIAAMGFDVVYLPPIHPIGKVHRKG HHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCC RNNSPTAGPTDVGSPWAIGSDEGGHDAVHPDLGTIEDFDAFVARARELGMEVALDLALQC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHEE APDHPWAREHRNWFTELPDGTIAYAENPPKKYQDIYPLNFDNDPAGLYDEVLRVVRHWID CCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH HGVKFFRVDNPHTKPPDFWAWLIAAVKGIDPDVLFLSEAFTPPVRQNGLTKLGFTQSYTY CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHCCCEECCCCCCEEE FTWRTAKWELTEFGNDIAALADFRRPNLFVNTPDILHAILQHNGPGMFAIRAVLAATMGP EEEEECEEEHHHHCCHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCC AWGVYSGYELFEHRAVREGSEEYLNSEKYELRPRDFAGALAEGRSLEPFITQLNTIRRLH CCCCCHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHH PALQQLRTIHFHGVDNDALLAYSKFDPATGDCVLVVVTLNAFGPEEATLFLDMAALGMEP HHHHHHHEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCH YERFWVRDEITGQEFQWGQANYVRIDPAQAVAHVINMPLIPDEARMTLLRRR HHHHEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRTARRARRTRADRNGVLVPGRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEA CCCHHHHHHHHCCCCCEEECCEEEECCCCHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH VAATLVVRYLGPAYPPVTETRRVKAVQAPVADREGRVDQQRIKPLSLPMTMGPEPYVFHG HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC QFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETELSNDLLVGAELFERAATGVP CCCCCCCEEEEEEECCCCCHHHHHHCCCEEEECCCCCCCHHCCCEEEHHHHHHHHHCCCC RARREPLLAAAAALRTAGDPVTRTALALAPEIEEILAEYPLRDLLTRGEQYGVWVDRPLA CHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCHHH RFGSWYEMFPRSTGGWDDDGNPVHGTFATAAAALPRIAAMGFDVVYLPPIHPIGKVHRKG HHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCC RNNSPTAGPTDVGSPWAIGSDEGGHDAVHPDLGTIEDFDAFVARARELGMEVALDLALQC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHEE APDHPWAREHRNWFTELPDGTIAYAENPPKKYQDIYPLNFDNDPAGLYDEVLRVVRHWID CCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH HGVKFFRVDNPHTKPPDFWAWLIAAVKGIDPDVLFLSEAFTPPVRQNGLTKLGFTQSYTY CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHCCCEECCCCCCEEE FTWRTAKWELTEFGNDIAALADFRRPNLFVNTPDILHAILQHNGPGMFAIRAVLAATMGP EEEEECEEEHHHHCCHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCC AWGVYSGYELFEHRAVREGSEEYLNSEKYELRPRDFAGALAEGRSLEPFITQLNTIRRLH CCCCCHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHH PALQQLRTIHFHGVDNDALLAYSKFDPATGDCVLVVVTLNAFGPEEATLFLDMAALGMEP HHHHHHHEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCH YERFWVRDEITGQEFQWGQANYVRIDPAQAVAHVINMPLIPDEARMTLLRRR HHHHEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]
Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> D-Glucose 6-phosphate + D-Glucose [C]
General reaction: O-Glycosyl bond hydrolysis [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]