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The map label for this gene is pdhR [C]

Identifier: 41408445

GI number: 41408445

Start: 2638700

End: 2639521

Strand: Direct

Name: pdhR [C]

Synonym: MAP2347

Alternate gene names: 41408445

Gene position: 2638700-2639521 (Clockwise)

Preceding gene: 41408442

Following gene: 41408446

Centisome position: 54.63

GC content: 69.95

Gene sequence:

>822_bases
ATGACCGCCTTGGGAATTGGCCCCGACGCCCGGCGCCGGTTGTCGGCGCCGCGGATCGCCGAAATCGTAGCCGACGAGCT
GCGCCGTCAAATCATCAGCGGCGAGCTGGCCGACGGCGATTTGTTGCCGCGCCAGGAGGTCCTGGTCGAGCAGTTCAACG
TGAGCCTGGTGTCGCTGCGCGAGGCGTTGCGGATTTTGGAGACCGAGGGCCTGGTTTCGGTGCGACGGGGCAACCGCGGC
GGCGCCGTCGTGCATGCCCCGGCGAAGACCAGCGCCGCCTACATGCTGGGCCTGCTGCTGCAGAGTGAATCCGTGGCGGT
GGCCGACCTGGGCATGGCGCTGCAGGAACTGGAGCCCGCCTGCGCCGCGTTGGCCGCGCGGCGACCGGACCGGGCGGACA
CGCTGGTGCCCGAGCTGACGAAGATCAACGAGTCGATGGCCACCCACCTCGACGACGGCCGGCTGTTCACCGAAATCGGC
CGCCAATTCCACGATCTCGTGGTCCGCGGCTGCGGAAACCACACCATCATCGCGGTGGTCGGCAGCCTGGAGACGCTGTG
GACCAGTCACGAACGGCAGTGGGCCGACGAGAGCTCCTCCCGCGGCACCTACCCCTCGCTCGCGCAGCGCCGCGCGGTGC
TCAACACCCACGTCAAGCTGACCGAGACCATCGCCGAGGGCAACGTCGACCGGGCCCGCCGGATCGCCGGCCGGCATCTG
GCCGACACCCAGACCTACGTGCTCTCCGGTCAGCCCGATCAACGGATTCACGCGTTCTCCCCGCAGGCGCTGGCGCGGCC
GCGGGACCTCCGGCGCTCCTGA

Upstream 100 bases:

>100_bases
TGCACCCGCCCTTCCGATCGACGCGCGATCAGGGAAGCTATTTATATCATTACTGTTAAAATAGCTAAGCCAGCGAGTTG
CTGTTCGTTTCGAGGATCGG

Downstream 100 bases:

>100_bases
AGGGCGGCCTGCGATCCTCATGCGAACCGCATTGGTCACCGGTGGCAGCGGCGGGATCGGTAAGGGGTGCGCTCGCAAGC
TGGTCGAACGCGGCTACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein GntR HTH; GntR Domain Protein; Transcriptional Regulator GntR Family; GntR Domain-Containing Protein; Transcriptional Regulator; Gntr Family Transcriptional Regulator; GntR Regulatory Protein; FadR Family Transcriptional Regulator

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTALGIGPDARRRLSAPRIAEIVADELRRQIISGELADGDLLPRQEVLVEQFNVSLVSLREALRILETEGLVSVRRGNRG
GAVVHAPAKTSAAYMLGLLLQSESVAVADLGMALQELEPACAALAARRPDRADTLVPELTKINESMATHLDDGRLFTEIG
RQFHDLVVRGCGNHTIIAVVGSLETLWTSHERQWADESSSRGTYPSLAQRRAVLNTHVKLTETIAEGNVDRARRIAGRHL
ADTQTYVLSGQPDQRIHAFSPQALARPRDLRRS

Sequences:

>Translated_273_residues
MTALGIGPDARRRLSAPRIAEIVADELRRQIISGELADGDLLPRQEVLVEQFNVSLVSLREALRILETEGLVSVRRGNRG
GAVVHAPAKTSAAYMLGLLLQSESVAVADLGMALQELEPACAALAARRPDRADTLVPELTKINESMATHLDDGRLFTEIG
RQFHDLVVRGCGNHTIIAVVGSLETLWTSHERQWADESSSRGTYPSLAQRRAVLNTHVKLTETIAEGNVDRARRIAGRHL
ADTQTYVLSGQPDQRIHAFSPQALARPRDLRRS
>Mature_272_residues
TALGIGPDARRRLSAPRIAEIVADELRRQIISGELADGDLLPRQEVLVEQFNVSLVSLREALRILETEGLVSVRRGNRGG
AVVHAPAKTSAAYMLGLLLQSESVAVADLGMALQELEPACAALAARRPDRADTLVPELTKINESMATHLDDGRLFTEIGR
QFHDLVVRGCGNHTIIAVVGSLETLWTSHERQWADESSSRGTYPSLAQRRAVLNTHVKLTETIAEGNVDRARRIAGRHLA
DTQTYVLSGQPDQRIHAFSPQALARPRDLRRS

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786303, Length=245, Percent_Identity=26.530612244898, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29909; Mature: 29778

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALGIGPDARRRLSAPRIAEIVADELRRQIISGELADGDLLPRQEVLVEQFNVSLVSLR
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EALRILETEGLVSVRRGNRGGAVVHAPAKTSAAYMLGLLLQSESVAVADLGMALQELEPA
HHHHHHHHCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CAALAARRPDRADTLVPELTKINESMATHLDDGRLFTEIGRQFHDLVVRGCGNHTIIAVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
GSLETLWTSHERQWADESSSRGTYPSLAQRRAVLNTHVKLTETIAEGNVDRARRIAGRHL
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
ADTQTYVLSGQPDQRIHAFSPQALARPRDLRRS
CCCCEEEECCCCCCCEECCCCHHHCCCHHHCCC
>Mature Secondary Structure 
TALGIGPDARRRLSAPRIAEIVADELRRQIISGELADGDLLPRQEVLVEQFNVSLVSLR
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EALRILETEGLVSVRRGNRGGAVVHAPAKTSAAYMLGLLLQSESVAVADLGMALQELEPA
HHHHHHHHCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CAALAARRPDRADTLVPELTKINESMATHLDDGRLFTEIGRQFHDLVVRGCGNHTIIAVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
GSLETLWTSHERQWADESSSRGTYPSLAQRRAVLNTHVKLTETIAEGNVDRARRIAGRHL
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
ADTQTYVLSGQPDQRIHAFSPQALARPRDLRRS
CCCCEEEECCCCCCCEECCCCHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA