Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407609

Identifier: 41407609

GI number: 41407609

Start: 1658699

End: 1660525

Strand: Direct

Name: 41407609

Synonym: MAP1511

Alternate gene names: NA

Gene position: 1658699-1660525 (Clockwise)

Preceding gene: 41407608

Following gene: 41407610

Centisome position: 34.34

GC content: 72.74

Gene sequence:

>1827_bases
ATGCAGCGATCCGCTACCGCTGAGGCCAACGTGTGGCGCGGCCGCGCGTCCGCCGCGGCCCTGGCCGCCCTGTTGCTCGC
GTCGGGCGCGCTGGCCGGACTGCCGCCGGCCGCCGCGATTTCGCCGCCGACGATCGACCCCGCGGCGGTGCCGCCGGACG
GACCGCCCGGTCCGGGCGCGCCGATGAAGCAGAACTCGTACTGCACCGAGGTCGGCGTGCTGCCGGGCACCGATTTTCGG
TTGCAGCCCAAGTACATGGACATGCTGAACCTGCAGGAGGCGTGGCAGTTCGGTCGCGGGGCCGGCCAGAAGGTGGCCGT
CATCGACACCGGCGTCACCCCGCACCCGCGGTTTCCGCACCTGATCCCGGGCGGCGACTACATCATGTCCGGCGACGGCC
TGTCCGACTGCGACGCGCACGGCACCCTGGTGGCCTCGATGATCGGGGCGGCGTCGGCCGACGGCGCGGGCGTCCCGCCG
GCGGCGCCGCGCAAACCGGTCACCATCCCCACCACCGAGCCGCCGCCCAAAGCGCCGCCGCCGCAGACGGTGACGCTCTC
GCCGCTGCCGCAGACCGTGACGATGGTCCCGCCCCCGCCGTCGCAGGAACAGCAACAGCCACCACCGGGACCGTTCGGGG
CGCCGCCCCCGCCGCCGGCGGCAGGACCGGCCCCGGCCGGACCACCGCCCGGGCCGCCGCAGGGCGGGCAGGCCCCGGCC
GGCAACCACGGCGGCGGCACGGTGACCATCCCGGGCCACGCGGGCGCCGCCCGGGTGACCAACGTCGACAACCTGCGCGG
CCCGCGCCCGCTCGACCCGCCGCCGGCGCCGCCCAAGCCGGGCCCCGACGCGTTCAGCGGGGTGGCCCCGGACGTCGACA
TCATCGCGATCCGGCAATCCAGCCAGGCGTTCGGCCTCAAAGACGCCTACACCGGCGACGAGGATCCCCAGACGCAGGCC
AAGATCGACAACGTGCAGACGATGGCGCGCGCGATCGTGCACGCCGCCAACATGGGCGCGTCGGTGATCAACATCTCCGA
CGTGACCTGCATGAGCGCCCGCAACATCATCGACCAGCGGGCGCTGGGCGCCGCGGTGCGCTACGCGGCGGTCGACAAGA
ACGCCGTCATCGTCGCCGCGGCCGGGGATACCAGCAAGAAGGACTGCAAACAGAACCCGCCGCATGATCCGTTGCAGCCC
AACGATCCTCGCAACTGGAACTCCGTCACCACCGTCGTGACGCCGTCCTGGTTCAGCGACTACGTGCTCACGGTCGGCGC
GGTCGACACCGAAGGCCACCCGCTCAGCCAGGGCAACCAGGGGCAGGCGTCGACCAGCGTGGCCGGCCCGTGGGTGGGAA
TCGCCGCGCCCGGCACCGACGTCGTCGGACTCTCACCCCGCGACGACGGGCTGATCAACGCCATCGACGGGCCGGACAAC
ACCCTGCTGGTCCCGTCCGGCACCAGCTTCTCTGCGGCGATCGTGTCCGGGGTGGCGGCGCTGGTTCGCGCCAAATACCC
GCAGCTGTCGGCGTACCAGGTGATCAACCGGCTGACGCGGACCGCCCGGGCGCCCGCGCGCGGGGTGGACAACCAGGTCG
GTCACGGGATCGTCGACCCGGTCGCGGCGCTGACCTGGGACGTGCCCGACGGGCCGGTCAAGCCGCCGCAGCAGCTCTCG
GCGCCGCTGACCATTCCGAAACCGGTCCCGCACCGGGATATGGTGCCAATATGGGTGGCGGCCGGAGGATTGTTCGGGGC
GCTCCTGATCGGCGGCGCAGTGTTCGGTACGGCGATGCTGATGAAGCGATCGCGCAGGCAGCAATAG

Upstream 100 bases:

>100_bases
AACACCGTCTACAGCCCGCTGTTCCGCAAGTTCGTGGAATGGATCGAATACCTCTGCCTGATGCCGATCTTCCCGCTGGC
ATTGTGGTTGATGAATGTCT

Downstream 100 bases:

>100_bases
GGGCGGAGCAGCAAGACTGATGAAGGCTCAGCGCAGATTGGGGTTGTCCTTGACGTGGCCCCGGCTGACCACGGTGTTTC
TGGTCGACATCGTGATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Serine Protease; Protease; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Secreted Subtilisin-Like Serine Protease; Subtilisin-Like Protein Serine Protease-Like Protein; Subtilisin-Like Serine Protease; Subtilisin Family Peptidase; S8 Family Peptidase; Secreted Protease; Membrane-Anchored Mycosin; Peptidase; Membrane-Associated Subtilase Family Protease; Serine Protease Membrane Protein; Esx Cluster Serine Peptidase

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR
LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP
AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA
GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA
KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP
NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN
TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS
APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ

Sequences:

>Translated_608_residues
MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR
LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP
AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA
GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA
KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP
NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN
TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS
APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ
>Mature_608_residues
MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR
LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP
AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA
GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA
KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP
NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN
TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS
APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62056; Mature: 62056

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGA
CCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMKQNSYCTEVGVLPGTDFRLQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPH
CCCCCCCEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
LIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPPAAPRKPVTIPTTEPPPKAPP
CCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
PQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA
CCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQS
CCCCCCEEEECCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SQAFGLKDAYTGDEDPQTQAKIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH
ALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQPNDPRNWNSVTTVVTPSWFSD
HHHHHHHHEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHCC
YVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCC
TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDP
EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC
VAALTWDVPDGPVKPPQQLSAPLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAML
HHHEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
MKRSRRQQ
HHHHHHCC
>Mature Secondary Structure
MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGA
CCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMKQNSYCTEVGVLPGTDFRLQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPH
CCCCCCCEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
LIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPPAAPRKPVTIPTTEPPPKAPP
CCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
PQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA
CCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQS
CCCCCCEEEECCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SQAFGLKDAYTGDEDPQTQAKIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH
ALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQPNDPRNWNSVTTVVTPSWFSD
HHHHHHHHEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHCC
YVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCC
TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDP
EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC
VAALTWDVPDGPVKPPQQLSAPLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAML
HHHEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
MKRSRRQQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA