| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407609
Identifier: 41407609
GI number: 41407609
Start: 1658699
End: 1660525
Strand: Direct
Name: 41407609
Synonym: MAP1511
Alternate gene names: NA
Gene position: 1658699-1660525 (Clockwise)
Preceding gene: 41407608
Following gene: 41407610
Centisome position: 34.34
GC content: 72.74
Gene sequence:
>1827_bases ATGCAGCGATCCGCTACCGCTGAGGCCAACGTGTGGCGCGGCCGCGCGTCCGCCGCGGCCCTGGCCGCCCTGTTGCTCGC GTCGGGCGCGCTGGCCGGACTGCCGCCGGCCGCCGCGATTTCGCCGCCGACGATCGACCCCGCGGCGGTGCCGCCGGACG GACCGCCCGGTCCGGGCGCGCCGATGAAGCAGAACTCGTACTGCACCGAGGTCGGCGTGCTGCCGGGCACCGATTTTCGG TTGCAGCCCAAGTACATGGACATGCTGAACCTGCAGGAGGCGTGGCAGTTCGGTCGCGGGGCCGGCCAGAAGGTGGCCGT CATCGACACCGGCGTCACCCCGCACCCGCGGTTTCCGCACCTGATCCCGGGCGGCGACTACATCATGTCCGGCGACGGCC TGTCCGACTGCGACGCGCACGGCACCCTGGTGGCCTCGATGATCGGGGCGGCGTCGGCCGACGGCGCGGGCGTCCCGCCG GCGGCGCCGCGCAAACCGGTCACCATCCCCACCACCGAGCCGCCGCCCAAAGCGCCGCCGCCGCAGACGGTGACGCTCTC GCCGCTGCCGCAGACCGTGACGATGGTCCCGCCCCCGCCGTCGCAGGAACAGCAACAGCCACCACCGGGACCGTTCGGGG CGCCGCCCCCGCCGCCGGCGGCAGGACCGGCCCCGGCCGGACCACCGCCCGGGCCGCCGCAGGGCGGGCAGGCCCCGGCC GGCAACCACGGCGGCGGCACGGTGACCATCCCGGGCCACGCGGGCGCCGCCCGGGTGACCAACGTCGACAACCTGCGCGG CCCGCGCCCGCTCGACCCGCCGCCGGCGCCGCCCAAGCCGGGCCCCGACGCGTTCAGCGGGGTGGCCCCGGACGTCGACA TCATCGCGATCCGGCAATCCAGCCAGGCGTTCGGCCTCAAAGACGCCTACACCGGCGACGAGGATCCCCAGACGCAGGCC AAGATCGACAACGTGCAGACGATGGCGCGCGCGATCGTGCACGCCGCCAACATGGGCGCGTCGGTGATCAACATCTCCGA CGTGACCTGCATGAGCGCCCGCAACATCATCGACCAGCGGGCGCTGGGCGCCGCGGTGCGCTACGCGGCGGTCGACAAGA ACGCCGTCATCGTCGCCGCGGCCGGGGATACCAGCAAGAAGGACTGCAAACAGAACCCGCCGCATGATCCGTTGCAGCCC AACGATCCTCGCAACTGGAACTCCGTCACCACCGTCGTGACGCCGTCCTGGTTCAGCGACTACGTGCTCACGGTCGGCGC GGTCGACACCGAAGGCCACCCGCTCAGCCAGGGCAACCAGGGGCAGGCGTCGACCAGCGTGGCCGGCCCGTGGGTGGGAA TCGCCGCGCCCGGCACCGACGTCGTCGGACTCTCACCCCGCGACGACGGGCTGATCAACGCCATCGACGGGCCGGACAAC ACCCTGCTGGTCCCGTCCGGCACCAGCTTCTCTGCGGCGATCGTGTCCGGGGTGGCGGCGCTGGTTCGCGCCAAATACCC GCAGCTGTCGGCGTACCAGGTGATCAACCGGCTGACGCGGACCGCCCGGGCGCCCGCGCGCGGGGTGGACAACCAGGTCG GTCACGGGATCGTCGACCCGGTCGCGGCGCTGACCTGGGACGTGCCCGACGGGCCGGTCAAGCCGCCGCAGCAGCTCTCG GCGCCGCTGACCATTCCGAAACCGGTCCCGCACCGGGATATGGTGCCAATATGGGTGGCGGCCGGAGGATTGTTCGGGGC GCTCCTGATCGGCGGCGCAGTGTTCGGTACGGCGATGCTGATGAAGCGATCGCGCAGGCAGCAATAG
Upstream 100 bases:
>100_bases AACACCGTCTACAGCCCGCTGTTCCGCAAGTTCGTGGAATGGATCGAATACCTCTGCCTGATGCCGATCTTCCCGCTGGC ATTGTGGTTGATGAATGTCT
Downstream 100 bases:
>100_bases GGGCGGAGCAGCAAGACTGATGAAGGCTCAGCGCAGATTGGGGTTGTCCTTGACGTGGCCCCGGCTGACCACGGTGTTTC TGGTCGACATCGTGATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Serine Protease; Protease; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Secreted Subtilisin-Like Serine Protease; Subtilisin-Like Protein Serine Protease-Like Protein; Subtilisin-Like Serine Protease; Subtilisin Family Peptidase; S8 Family Peptidase; Secreted Protease; Membrane-Anchored Mycosin; Peptidase; Membrane-Associated Subtilase Family Protease; Serine Protease Membrane Protein; Esx Cluster Serine Peptidase
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ
Sequences:
>Translated_608_residues MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ >Mature_608_residues MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGAPMKQNSYCTEVGVLPGTDFR LQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPHLIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPP AAPRKPVTIPTTEPPPKAPPPQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQSSQAFGLKDAYTGDEDPQTQA KIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQRALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQP NDPRNWNSVTTVVTPSWFSDYVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDPVAALTWDVPDGPVKPPQQLS APLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAMLMKRSRRQQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62056; Mature: 62056
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGA CCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PMKQNSYCTEVGVLPGTDFRLQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPH CCCCCCCEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC LIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPPAAPRKPVTIPTTEPPPKAPP CCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC PQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA CCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQS CCCCCCEEEECCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SQAFGLKDAYTGDEDPQTQAKIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQPNDPRNWNSVTTVVTPSWFSD HHHHHHHHEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHCC YVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCC TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDP EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC VAALTWDVPDGPVKPPQQLSAPLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAML HHHEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH MKRSRRQQ HHHHHHCC >Mature Secondary Structure MQRSATAEANVWRGRASAAALAALLLASGALAGLPPAAAISPPTIDPAAVPPDGPPGPGA CCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PMKQNSYCTEVGVLPGTDFRLQPKYMDMLNLQEAWQFGRGAGQKVAVIDTGVTPHPRFPH CCCCCCCEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC LIPGGDYIMSGDGLSDCDAHGTLVASMIGAASADGAGVPPAAPRKPVTIPTTEPPPKAPP CCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC PQTVTLSPLPQTVTMVPPPPSQEQQQPPPGPFGAPPPPPAAGPAPAGPPPGPPQGGQAPA CCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNHGGGTVTIPGHAGAARVTNVDNLRGPRPLDPPPAPPKPGPDAFSGVAPDVDIIAIRQS CCCCCCEEEECCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SQAFGLKDAYTGDEDPQTQAKIDNVQTMARAIVHAANMGASVINISDVTCMSARNIIDQR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ALGAAVRYAAVDKNAVIVAAAGDTSKKDCKQNPPHDPLQPNDPRNWNSVTTVVTPSWFSD HHHHHHHHEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHCC YVLTVGAVDTEGHPLSQGNQGQASTSVAGPWVGIAAPGTDVVGLSPRDDGLINAIDGPDN EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEECCCCC TLLVPSGTSFSAAIVSGVAALVRAKYPQLSAYQVINRLTRTARAPARGVDNQVGHGIVDP EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC VAALTWDVPDGPVKPPQQLSAPLTIPKPVPHRDMVPIWVAAGGLFGALLIGGAVFGTAML HHHEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH MKRSRRQQ HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA