| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407486
Identifier: 41407486
GI number: 41407486
Start: 1501269
End: 1501664
Strand: Direct
Name: 41407486
Synonym: MAP1388
Alternate gene names: NA
Gene position: 1501269-1501664 (Clockwise)
Preceding gene: 41407479
Following gene: 41407487
Centisome position: 31.08
GC content: 70.2
Gene sequence:
>396_bases ATGTCAAGGTTTCGGATCGTCAACGCGATGATCGCCGGGGCGCTGCTGTCCGGTGGCGTCGCCGCCGCCGGGCTGGGACT GGGCGCCGGGGCCGCGCACGCCACCAAGGGCCCGTTCACCTGGTGCCCGGGGCAGTCCATGGAGTGGCCGAGCGGCCCGA ACTCCTCGCGCGGTCACCTGAACTACGTCTGGGACATAAACGTGTGCCACACCTGGTACGTCGTCCCCGACGGCTGGGGC AACGTCCCGCGCATCGCGCTCAACGGTCAGCAGACGCTGCAGAGCTCGAACGCGTGGGACGGCGACAACCCGCCGGGCGA CAATCCGGGCAACGTCCAGTGCGGCCTGATGTGGTGCCCCAACCCCGGGGGCCAGGATCCCGGCTTCCACGGCTGA
Upstream 100 bases:
>100_bases TCTGTACTGATTCGAGTTAGCCGATTAGCCATGCGGGGGATGCGGTGCCGGCGAATACTGGTCGGCACCGGTAATCCCGT CCGGGAAAGGGCGTGGGGCC
Downstream 100 bases:
>100_bases GTGCCGGTTGCCGGACGGCGAACCACCGCGCCGGCACCACGATGAGCTTTCCGCGCAGCACCGCACGGTCGCCGACCGCG CCGCCGGAAGGCGATTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSRFRIVNAMIAGALLSGGVAAAGLGLGAGAAHATKGPFTWCPGQSMEWPSGPNSSRGHLNYVWDINVCHTWYVVPDGWG NVPRIALNGQQTLQSSNAWDGDNPPGDNPGNVQCGLMWCPNPGGQDPGFHG
Sequences:
>Translated_131_residues MSRFRIVNAMIAGALLSGGVAAAGLGLGAGAAHATKGPFTWCPGQSMEWPSGPNSSRGHLNYVWDINVCHTWYVVPDGWG NVPRIALNGQQTLQSSNAWDGDNPPGDNPGNVQCGLMWCPNPGGQDPGFHG >Mature_130_residues SRFRIVNAMIAGALLSGGVAAAGLGLGAGAAHATKGPFTWCPGQSMEWPSGPNSSRGHLNYVWDINVCHTWYVVPDGWGN VPRIALNGQQTLQSSNAWDGDNPPGDNPGNVQCGLMWCPNPGGQDPGFHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13697; Mature: 13566
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFRIVNAMIAGALLSGGVAAAGLGLGAGAAHATKGPFTWCPGQSMEWPSGPNSSRGHL CCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE NYVWDINVCHTWYVVPDGWGNVPRIALNGQQTLQSSNAWDGDNPPGDNPGNVQCGLMWCP EEEEEEEEEEEEEEEECCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC NPGGQDPGFHG CCCCCCCCCCC >Mature Secondary Structure SRFRIVNAMIAGALLSGGVAAAGLGLGAGAAHATKGPFTWCPGQSMEWPSGPNSSRGHL CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE NYVWDINVCHTWYVVPDGWGNVPRIALNGQQTLQSSNAWDGDNPPGDNPGNVQCGLMWCP EEEEEEEEEEEEEEEECCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC NPGGQDPGFHG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA