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The map label for this gene is pks10

Identifier: 41407467

GI number: 41407467

Start: 1472154

End: 1473215

Strand: Direct

Name: pks10

Synonym: MAP1369

Alternate gene names: 41407467

Gene position: 1472154-1473215 (Clockwise)

Preceding gene: 41407466

Following gene: 41407468

Centisome position: 30.48

GC content: 71.0

Gene sequence:

>1062_bases
ATGAGCGTCATCGCCGGCGTGTTCGGTGCGCTGCCGCCGCACCGCTATCCGCAGCGTGAGCTCACCGACTTCTTCGTCAG
CATCCCCGAATTCGAAGGCTACGAGGACATCGTGCGGCAGCTGCATGCCAGCGCCAAGGTCGGCAGCCGCCATCTGGTGC
TGCCGCTCGAGCAATACCCCACGCTGACCGACTTCGGCGTGGCCAACCGGATCTTCATCGAACACGCGGTGACCCTGGGC
TGCGCGGCGCTGTCCGGCGCGCTCGACGAGGCCGGCCTGAAACCCGAAGACCTCGACGTGCTGATCACCACCACGGTCAC
CGGCCTGGCGGTGCCCTCGGTGGACGCCCGGATCGCCGCGCGGCTCGGTCTGCGCGACGACGTGCGCCGGGTGCCGCTGT
TCGGGCTCGGCTGCGTGGCCGGCGCCGCCGGGGTGGCCCGCATGCACGACTACCTGCGCGGCGCACCGGACGCCGTCGCC
GCCCTGGTCTCGGTCGAGCTGTGCTCGCTGACCTACCCCGGCTACAAGCCGTCGCTGGCCGGGCTGGTCGGCAGCGCCCT
GTTCGCCGACGGCGCCGGGGCCGTGGTGGCGGTGGGCGAGCGGCGCGCCGAGCAGCTCGACGCCGCCGGCCCCAGCGTCC
TGGATTCGCGCAGCCACCTGTATCCGGATTCGCTGCGCACCATGGGCTACGACGTGGGCGCGACGGGATTCGAGCTGGTG
CTGTCCAAGGACGTCGCGGCCGTCGTCGAGCAGTACATCGAGGACGACGTCACCGGATTCCTCGGGGCGCACGGCCTGAC
CACCAACGATATCGGCGCCTTCGTCAGCCATCCGGGCGGGCCCAAGGTGATCGAGGCCATCAACGCCGCCCTCGGCCTGC
CGCCGGAGGCGCTGGAACTGACCTGGCGGTCACTCGGCGAGATCGGCAACCTGTCGTCGGCGTCGGTGCTGCACGTGCTG
CGCGACACCCTCGCCAAGCCGCCGCCGAGCGACAGCCCCGGCCTGATGCTCGCGATGGGGCCGGGTTTCTGCTCCGAACT
GGTGTTGTTGCGTTGGCACTGA

Upstream 100 bases:

>100_bases
CGATTTACCTGCCGGTAAATTGCAACCGGACTAGACTTCCCGCTCGAGCGATGCGGCTGAACCTGTCAGCCCGACCGGTC
GTGATCAAGGGGTGGGTGCA

Downstream 100 bases:

>100_bases
CCCTCGCCCGTGCACGAATGCGGAAGTATCGCTGTGAGTGACACCCGAGGCCGCCTCCGATGAGCGGCGACACCGAGGAA
CTGGTCCGGGCGCTGCGCCA

Product: Pks10

Products: NA

Alternate protein names: Naringenin-chalcone synthase [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQLHASAKVGSRHLVLPLEQYPTLTDFGVANRIFIEHAVTLG
CAALSGALDEAGLKPEDLDVLITTTVTGLAVPSVDARIAARLGLRDDVRRVPLFGLGCVAGAAGVARMHDYLRGAPDAVA
ALVSVELCSLTYPGYKPSLAGLVGSALFADGAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELV
LSKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAALGLPPEALELTWRSLGEIGNLSSASVLHVL
RDTLAKPPPSDSPGLMLAMGPGFCSELVLLRWH

Sequences:

>Translated_353_residues
MSVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQLHASAKVGSRHLVLPLEQYPTLTDFGVANRIFIEHAVTLG
CAALSGALDEAGLKPEDLDVLITTTVTGLAVPSVDARIAARLGLRDDVRRVPLFGLGCVAGAAGVARMHDYLRGAPDAVA
ALVSVELCSLTYPGYKPSLAGLVGSALFADGAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELV
LSKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAALGLPPEALELTWRSLGEIGNLSSASVLHVL
RDTLAKPPPSDSPGLMLAMGPGFCSELVLLRWH
>Mature_352_residues
SVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQLHASAKVGSRHLVLPLEQYPTLTDFGVANRIFIEHAVTLGC
AALSGALDEAGLKPEDLDVLITTTVTGLAVPSVDARIAARLGLRDDVRRVPLFGLGCVAGAAGVARMHDYLRGAPDAVAA
LVSVELCSLTYPGYKPSLAGLVGSALFADGAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELVL
SKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAALGLPPEALELTWRSLGEIGNLSSASVLHVLR
DTLAKPPPSDSPGLMLAMGPGFCSELVLLRWH

Specific function: Unknown

COG id: COG3424

COG function: function code Q; Predicted naringenin-chalcone synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chalcone/stilbene synthases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012328
- InterPro:   IPR018088
- InterPro:   IPR001099
- InterPro:   IPR011141
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF02797 Chal_sti_synt_C; PF00195 Chal_sti_synt_N [H]

EC number: =2.3.1.74 [H]

Molecular weight: Translated: 37052; Mature: 36921

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQLHASAKVGSRHLVLPLEQYP
CCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCC
TLTDFGVANRIFIEHAVTLGCAALSGALDEAGLKPEDLDVLITTTVTGLAVPSVDARIAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCHHHHHH
RLGLRDDVRRVPLFGLGCVAGAAGVARMHDYLRGAPDAVAALVSVELCSLTYPGYKPSLA
HCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHH
GLVGSALFADGAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELV
HHHHHHHHCCCCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHHH
LSKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAALGLPPEALEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
TWRSLGEIGNLSSASVLHVLRDTLAKPPPSDSPGLMLAMGPGFCSELVLLRWH
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHEEEECC
>Mature Secondary Structure 
SVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQLHASAKVGSRHLVLPLEQYP
CHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCC
TLTDFGVANRIFIEHAVTLGCAALSGALDEAGLKPEDLDVLITTTVTGLAVPSVDARIAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCHHHHHH
RLGLRDDVRRVPLFGLGCVAGAAGVARMHDYLRGAPDAVAALVSVELCSLTYPGYKPSLA
HCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHH
GLVGSALFADGAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELV
HHHHHHHHCCCCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHHH
LSKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAALGLPPEALEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
TWRSLGEIGNLSSASVLHVLRDTLAKPPPSDSPGLMLAMGPGFCSELVLLRWH
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]