Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
---|---|
Accession | NC_002944 |
Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is argC
Identifier: 41407459
GI number: 41407459
Start: 1463489
End: 1464532
Strand: Direct
Name: argC
Synonym: MAP1361
Alternate gene names: 41407459
Gene position: 1463489-1464532 (Clockwise)
Preceding gene: 41407458
Following gene: 41407460
Centisome position: 30.3
GC content: 73.47
Gene sequence:
>1044_bases ATGGCCGACGTGATGAGGGTGGCGGTAGCCGGTGCCAGCGGCTATGCGGGCGGTGAGATCCTACGCCTGCTGCTCGGGCA CCCGGCTTACGCCCAGGGGCGGCTGGCGATCGGCGCGGTGACCGCCGCGGCCAGCGCCGGCAGCCCACTCGGCGAGCATC ACCCGCACCTGACGCCGTTGGCCCAGCGCGTGCTGGAGCCCACCGACGCCGCCGTGCTGGCCGGCCACGACGTGGTGTTT CTGGCGTTGCCGCACGGACATTCGGCGGCGCTGGCCGACCAGCTCGGCGCCGACACGCTGATCGTCGACTGCGGCGCGGA CTTCCGGCTGACCGACGCCGCCGCCTGGGAGCGGTTCTACGGCTCGCCGCACGCCGGCAGTTGGCCCTACGGGCTGCCGG AGCTGCCCGGGGCGCGCGAGCGGCTGCGCGGCGCCCGCCGGATCGCGGTGCCGGGCTGCTACCCGACCGCGGCGCTGCTG GCCCTGCTGCCCGCGATGGCCGAGGACCTGATCGAGCCCGCCGTCACCGTGGTCGCCGTCAGCGGCACCTCCGGAGCCGG TCGCGCCGCCAAGACCGACCTACTGGGCTCGGAGGTCATCGGGTCGGCGCGGGCCTACAACATCGCCGGGGCGCACCGGC ACACCCCCGAGATCGCCCAGGGCCTGGCGGCCGTGTCCGGACGCGACGTCACGGTGTCGTTCACCCCGGTGCTGATCCCG ACCTCGCGCGGCATCCTGGCCACCTGCACCGCCCGCACCACCGCGCCGTTTTCGGCGCTTCGGGCCGCATACGAAAAGGC TTATGACGCAGAGCCTTTCATCTACCTGATGCCCGAGGGACAGCTGCCGCGGACCGGGGCGGTGATCGGCAGCAACGCGG CGCACATCGCGGTGGCGGTGGACGAGGCGGCGGGCGTGCTGGTGGCGATCGCCGCGATCGACAACCTGGTCAAGGGAACC GCCGGGGCGGCCGTGCAGTCGATGAACCTGGCGCTGGGTTGGCCGGAGACACAAGGACTTTCGGTGATCGGGGTGGCGCC GTGA
Upstream 100 bases:
>100_bases ACGCCGCGGTGCGCCGGGCCGCCGAGGCGGTCGGCGCCGAGCTGCGCACCTAGATGGAATGGATTTGCAAAGTACTGCAT AACCATGCAGAATCGTCCAA
Downstream 100 bases:
>100_bases CCGAGACGGTGAACGCGGCGCGGCTGCTGCGCGAGCAGGGCGTCACCGCGCCGGCCGGCTTCCGGGCCGCCGGCATCGCC GCGGGGATCAAGGCGTCGGG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MADVMRVAVAGASGYAGGEILRLLLGHPAYAQGRLAIGAVTAAASAGSPLGEHHPHLTPLAQRVLEPTDAAVLAGHDVVF LALPHGHSAALADQLGADTLIVDCGADFRLTDAAAWERFYGSPHAGSWPYGLPELPGARERLRGARRIAVPGCYPTAALL ALLPAMAEDLIEPAVTVVAVSGTSGAGRAAKTDLLGSEVIGSARAYNIAGAHRHTPEIAQGLAAVSGRDVTVSFTPVLIP TSRGILATCTARTTAPFSALRAAYEKAYDAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEAAGVLVAIAAIDNLVKGT AGAAVQSMNLALGWPETQGLSVIGVAP
Sequences:
>Translated_347_residues MADVMRVAVAGASGYAGGEILRLLLGHPAYAQGRLAIGAVTAAASAGSPLGEHHPHLTPLAQRVLEPTDAAVLAGHDVVF LALPHGHSAALADQLGADTLIVDCGADFRLTDAAAWERFYGSPHAGSWPYGLPELPGARERLRGARRIAVPGCYPTAALL ALLPAMAEDLIEPAVTVVAVSGTSGAGRAAKTDLLGSEVIGSARAYNIAGAHRHTPEIAQGLAAVSGRDVTVSFTPVLIP TSRGILATCTARTTAPFSALRAAYEKAYDAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEAAGVLVAIAAIDNLVKGT AGAAVQSMNLALGWPETQGLSVIGVAP >Mature_346_residues ADVMRVAVAGASGYAGGEILRLLLGHPAYAQGRLAIGAVTAAASAGSPLGEHHPHLTPLAQRVLEPTDAAVLAGHDVVFL ALPHGHSAALADQLGADTLIVDCGADFRLTDAAAWERFYGSPHAGSWPYGLPELPGARERLRGARRIAVPGCYPTAALLA LLPAMAEDLIEPAVTVVAVSGTSGAGRAAKTDLLGSEVIGSARAYNIAGAHRHTPEIAQGLAAVSGRDVTVSFTPVLIPT SRGILATCTARTTAPFSALRAAYEKAYDAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEAAGVLVAIAAIDNLVKGTA GAAVQSMNLALGWPETQGLSVIGVAP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=356, Percent_Identity=37.3595505617978, Blast_Score=155, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6320913, Length=360, Percent_Identity=27.7777777777778, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 35252; Mature: 35120
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS01224 ARGC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVMRVAVAGASGYAGGEILRLLLGHPAYAQGRLAIGAVTAAASAGSPLGEHHPHLTPL CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCHH AQRVLEPTDAAVLAGHDVVFLALPHGHSAALADQLGADTLIVDCGADFRLTDAAAWERFY HHHHCCCCCCEEEECCCEEEEEECCCCCHHHHHHCCCCEEEEECCCCCEECHHHHHHHHC GSPHAGSWPYGLPELPGARERLRGARRIAVPGCYPTAALLALLPAMAEDLIEPAVTVVAV CCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE SGTSGAGRAAKTDLLGSEVIGSARAYNIAGAHRHTPEIAQGLAAVSGRDVTVSFTPVLIP ECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEE TSRGILATCTARTTAPFSALRAAYEKAYDAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAV CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCEEEEEEE DEAAGVLVAIAAIDNLVKGTAGAAVQSMNLALGWPETQGLSVIGVAP CCCCCHHHHHHHHHHHHHCCCCHHHEECEEEECCCCCCCEEEEEECC >Mature Secondary Structure ADVMRVAVAGASGYAGGEILRLLLGHPAYAQGRLAIGAVTAAASAGSPLGEHHPHLTPL CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCHH AQRVLEPTDAAVLAGHDVVFLALPHGHSAALADQLGADTLIVDCGADFRLTDAAAWERFY HHHHCCCCCCEEEECCCEEEEEECCCCCHHHHHHCCCCEEEEECCCCCEECHHHHHHHHC GSPHAGSWPYGLPELPGARERLRGARRIAVPGCYPTAALLALLPAMAEDLIEPAVTVVAV CCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE SGTSGAGRAAKTDLLGSEVIGSARAYNIAGAHRHTPEIAQGLAAVSGRDVTVSFTPVLIP ECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEE TSRGILATCTARTTAPFSALRAAYEKAYDAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAV CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCEEEEEEE DEAAGVLVAIAAIDNLVKGTAGAAVQSMNLALGWPETQGLSVIGVAP CCCCCHHHHHHHHHHHHHCCCCHHHEECEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA