| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pykA
Identifier: 41407408
GI number: 41407408
Start: 1397456
End: 1398874
Strand: Direct
Name: pykA
Synonym: MAP1310
Alternate gene names: 41407408
Gene position: 1397456-1398874 (Clockwise)
Preceding gene: 41407407
Following gene: 41407409
Centisome position: 28.93
GC content: 68.29
Gene sequence:
>1419_bases GTGAGTAGACGCGGGAAGATCGTCTGCACCCTTGGCCCGGCGACCAATTCGGACGAGTTGATTTTGGCGCTGGTCGAGGC CGGAATGGACGTCGCCCGACTGAACTTCAGCCACGGCGACTACGCCGACCACAAAGCCGCCTACGAACGGGTGCGGGTGG CCTCCGACGCCACCGGCCGCGCCGTCGGCGTGCTCGCCGATCTGCAGGGCCCCAAGATCCGCCTGGGGCGCTTTGCCACC GGGCCCACCTACTGGGCCGACGGCGAAACGGTCCGCATCACCGTCGCCGACTGCGAAGGCAGCCACGACCGGGTGTCGAC CACCTACAAACAACTGGCCCAGGACGCCGCGGTCGGGGACCGGGTCCTGGTCGACGACGGCAAGGTCGGCCTGGTGGTCG ACGGCATCGAGGGCGACGACGTCATCTGCACCGTGGTCGAGGGCGGCCCGGTCAGCAACAACAAGGGCATCTCGCTGCCG GGCATGAACGTCTCCGCACCGGCCTTGTCCGACAAGGACATCGAGGACCTCACCTTCGCGCTCGAGCTGGGCGTCGACCT GGTCGCGCTGTCCTTCGTGCGTTCGCCCTCCGACGTCGAGCTGGTGCACGAGGTGATGGACCGCGTCGGCCGGCGGGTGC CCGTGATCGCCAAACTGGAAAAGCCGGAGGCCGTCGACAACCTGGAAGCCATCGTGCTGGCCTTCGACGCCATCATGGTG GCCCGCGGCGACCTCGGTGTCGAACTTCCCCTGGAAGAGGTTCCGCTGGTGCAGAAGCGGGCCATCCAGATGGCCCGGGA GAACGCCAAACCCGTCATCGTGGCAACCCAGATGCTCGATTCGATGATCGAGAACTCACGGCCGACCCGGGCCGAGGCCT CCGACGTCGCCAACGCCGTGCTGGACGGCGCCGACGCCGTGATGCTGTCCGGGGAGACCTCGGTGGGCAAGTACCCGCTG GCGGCCGTGCGGACCATGGCGCGCATCATCTGCGCGGTCGAGGACAACTCCACGGCCGCCCCGCCGCTCACCCACGTGCC CCGCACCAAACGCGGGGTGATCTCGTATGCGGCCCGCGACATCGGCGAACGCCTGGACGCCAAGGCGCTGGTCGCGTTCA CCCAGTCCGGCGACACCGTCAAGCGGCTGGCGCGGTTGCACACCCCGCTGCCGCTGCTGGCCTTCACGGCATGGCCGGAG GTGCGCAGCCAGCTGGCCATGACCTGGGGCACCGAGACGTTCATCGTGCCGATGATGACCTCCACCGACGGCATGATCCG CCAGGTGGACAAGTCGCTGCTGGAACTCGGTCGGTACCGGCGTGGTGACCTGGTGGTGATCGTCGCCGGCGCGCCACCTG GCACAGTAGGGTCAACCAACCTGATCCACGTGCACCGGATCGGGGAGGACGACGTCTAG
Upstream 100 bases:
>100_bases CTTCCCCCTGTTTCCGACTGTTCTCGGTGGGTAACAGCACACTGCGCGCCGTGCGTTATGTGCGGGCCGGGACGCGGGCA CACGACTATGCTGGGTCGGC
Downstream 100 bases:
>100_bases CCTGCCCGGCGACGACACGGGCCGCTGCGCGGCCTGAGGAACGGGCGGGCGCATCGAACCAGAGGAGAGCTCGTGCCAGC CGGCGCTGAATCCCAGGAGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSRRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIRLGRFAT GPTYWADGETVRITVADCEGSHDRVSTTYKQLAQDAAVGDRVLVDDGKVGLVVDGIEGDDVICTVVEGGPVSNNKGISLP GMNVSAPALSDKDIEDLTFALELGVDLVALSFVRSPSDVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMV ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPL AAVRTMARIICAVEDNSTAAPPLTHVPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPE VRSQLAMTWGTETFIVPMMTSTDGMIRQVDKSLLELGRYRRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV
Sequences:
>Translated_472_residues MSRRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIRLGRFAT GPTYWADGETVRITVADCEGSHDRVSTTYKQLAQDAAVGDRVLVDDGKVGLVVDGIEGDDVICTVVEGGPVSNNKGISLP GMNVSAPALSDKDIEDLTFALELGVDLVALSFVRSPSDVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMV ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPL AAVRTMARIICAVEDNSTAAPPLTHVPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPE VRSQLAMTWGTETFIVPMMTSTDGMIRQVDKSLLELGRYRRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV >Mature_471_residues SRRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIRLGRFATG PTYWADGETVRITVADCEGSHDRVSTTYKQLAQDAAVGDRVLVDDGKVGLVVDGIEGDDVICTVVEGGPVSNNKGISLPG MNVSAPALSDKDIEDLTFALELGVDLVALSFVRSPSDVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMVA RGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPLA AVRTMARIICAVEDNSTAAPPLTHVPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPEV RSQLAMTWGTETFIVPMMTSTDGMIRQVDKSLLELGRYRRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=491, Percent_Identity=36.6598778004073, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI33286420, Length=491, Percent_Identity=36.6598778004073, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI33286418, Length=494, Percent_Identity=36.8421052631579, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=36.8421052631579, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=36.8421052631579, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=38.5416666666667, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=38.5416666666667, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=36.0169491525424, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=36.0169491525424, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=35.5140186915888, Blast_Score=131, Evalue=2e-30, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=42.5531914893617, Blast_Score=350, Evalue=1e-97, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=39.1213389121339, Blast_Score=285, Evalue=5e-78, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=35.2459016393443, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17506829, Length=483, Percent_Identity=37.6811594202899, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI71984413, Length=483, Percent_Identity=37.6811594202899, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=37.5257731958763, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17506831, Length=483, Percent_Identity=37.6811594202899, Blast_Score=275, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6319279, Length=483, Percent_Identity=34.5755693581781, Blast_Score=265, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=34.2857142857143, Blast_Score=244, Evalue=2e-65, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=36.530612244898, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=36.530612244898, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24648966, Length=461, Percent_Identity=34.9240780911063, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=27.7777777777778, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24646914, Length=283, Percent_Identity=34.982332155477, Blast_Score=148, Evalue=7e-36,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50453; Mature: 50322
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGR CCCCCCEEEEECCCCCCCCEEHEEHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC AVGVLADLQGPKIRLGRFATGPTYWADGETVRITVADCEGSHDRVSTTYKQLAQDAAVGD EEEEEEECCCCEEEECEEECCCCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCC RVLVDDGKVGLVVDGIEGDDVICTVVEGGPVSNNKGISLPGMNVSAPALSDKDIEDLTFA EEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH LELGVDLVALSFVRSPSDVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHE ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAV ECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADAVMLSGETSVGKYPLAAVRTMARIICAVEDNSTAAPPLTHVPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH IGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPMMT HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHEECCHHHHHHEEHCCCCCEEEEEEEE STDGMIRQVDKSLLELGRYRRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure SRRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGR CCCCCEEEEECCCCCCCCEEHEEHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC AVGVLADLQGPKIRLGRFATGPTYWADGETVRITVADCEGSHDRVSTTYKQLAQDAAVGD EEEEEEECCCCEEEECEEECCCCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCC RVLVDDGKVGLVVDGIEGDDVICTVVEGGPVSNNKGISLPGMNVSAPALSDKDIEDLTFA EEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH LELGVDLVALSFVRSPSDVELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIVLAFDAIMV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHE ARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAV ECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADAVMLSGETSVGKYPLAAVRTMARIICAVEDNSTAAPPLTHVPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH IGERLDAKALVAFTQSGDTVKRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPMMT HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHEECCHHHHHHEEHCCCCCEEEEEEEE STDGMIRQVDKSLLELGRYRRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDV CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA