Click here to switch to the map view.

The map label for this gene is yliB [C]

Identifier: 41407143

GI number: 41407143

Start: 1093563

End: 1095236

Strand: Direct

Name: yliB [C]

Synonym: MAP1045

Alternate gene names: 41407143

Gene position: 1093563-1095236 (Clockwise)

Preceding gene: 41407142

Following gene: 41407144

Centisome position: 22.64

GC content: 72.46

Gene sequence:

>1674_bases
GTGGCCATCCGCATCGGCCGTCGCGGCCTGACGGGGTGGGTGGGCATCGGTATGGCCGTGCTGGTCGTCGCGGGCGTCGC
CCTGGCCGGCTGCGCGGGCAGCGCCGCGGCCGAGATCGACTACGTGGTCGACGGACCGCTGAGCAGCTACAACCCCAACA
CCGTCGTCGGCGCCGCCTCGGCCGGAGCGCAGGCGTTCGCCCGCACCCTCGTCGGGTTCAGCTATCACGGCCCCGACGGG
CAAACCGTCCCCGACCGCGACTTCGGCACCGTCTCGGTGGTCGGCGGCACCCCGCTGGTGCTCGACTACCAGATCGCCGA
CAACGCCGTCTACTCCGACGGCAAGCCGGTGACCTGCGACGACATCGTGCTGGCCTGGGCCGCCCAGTCCGGCCGGTACC
CGGAGTTCAACGCCGCCACCCAGGCCGGCTACCTCGACATCGCCAACGTCGAATGCATGCCCGGGCAGAAGAAGGCCCGG
GTGTCCTTCGTCCCCGACCGCGGCATCGTCGACTACAACCAGCTGTTCACCGCGACCACGCTGATGCCGTCGCACGTCAT
CGCCGACCAGCTCAACGTCGACGTCACCGCGGCCCTGCTCAGCCACAACGCGCCGCTGGTGGCGCAGATCGCCAGGCTGT
GGAACACCATCTGGGACCTCAAACCCGGGCTGAAGGGTGAGGAGATCGTCAAGCGCTTCCCGTCGTCGGGGCCCTACAAG
CTGCAGGCCGTCCTGGACGGCGGCGCGGTGGTGCTGGTCGCCAACGACCGGTGGTGGGGCCCCAAGGCCATCACCAAGCG
GATCACCGTGTGGCCGCAGGGCCCCGACATCCAGGACCGGGTCAACAACCGCAGCGTCGACGTGGTCGACGTGGCCGTCG
GCTCCTCGGGCACGCTGGCCACGCCGGACAACTACGACCGCTCCGACGCCCCCTCCGACGGCATCGAGCAGCTGATCTTC
GCCCCGCAGGGGCCGCTGTCGGCGCCCAAGGCCCGCCGCGCGTTCGCGCTGTGCACCCCCCGCGACGTGCTGGCCAAGGA
CGCCGGGACGCCGATCGCCAACTCCCGCCTGGACCCGGCCGTCGACGACGCCGTGTCCGCGGACGACGGCGCCGCCGAGG
CCGCCCCGTTCGGCAAGGCCGACCCGGTCGCCGCCCGCGAGGCGCTGGGCGGCGCGCCGCTCGCGGTGCGCATCGGCTAC
CAGGGGCCCAACGCCCGGCTCGCGGTCAACGTCGGCGTCATCACCAAGGCCTGCGCCCCGGCCGGCATCACCGTCTCCGG
GGTCACCCTGGACAGCGCGGGCCCGCAGGCGCTGCGGGACGGCAAGATCGACGCCCTGCTGGCCAGCACCGGCGGCGCGA
CCGGCAGCGGATCGAGCGGGTCGTCGGCGATGGACGCCTACGCCCTGCACACCGGCAACGGCAACAACCTGTCCGGCTAC
TCCAATCCGCAGGTGGACAACGCGATCGGGGCGCTGGCGGTGTCGGCCGACCCCGCCGAGCGGGTCCGGCTGCTGGCCGA
GACCGCCCCGGTGCTGTGGGGCGACCTGCCCACGCTGCCGCTGTACCGGCAGCAGCGCACCCTGCTGATCTCCAAGAAGA
TGTACGCGGTGAGCAAGAACCCCACCCGGTGGGGCGCGGGGTGGAACATGGACCGATGGGCCCTGGTGCAGTGA

Upstream 100 bases:

>100_bases
CGGCCCGCGCCGAGCAAGCCGGCGCCGGGTGCCCGGCCGGTGCGGCCCACTGGGGCCCGGCGTCCGACCGGCAAGCGGAA
CGTCGGCCGGCGGTAGACAC

Downstream 100 bases:

>100_bases
GGTCGGCATGACGGACGCCGGCGAAGCGACGCCGGTCGCGGAGCTCATCGCGTCGCTGACCCGGCAGGTGCCCGATTTCC
CCAAGCCCGGCATCCAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MAIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSYHGPDG
QTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKAR
VSFVPDRGIVDYNQLFTATTLMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYK
LQAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLATPDNYDRSDAPSDGIEQLIF
APQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGY
QGPNARLAVNVGVITKACAPAGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGY
SNPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWALVQ

Sequences:

>Translated_557_residues
MAIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSYHGPDG
QTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKAR
VSFVPDRGIVDYNQLFTATTLMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYK
LQAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLATPDNYDRSDAPSDGIEQLIF
APQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGY
QGPNARLAVNVGVITKACAPAGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGY
SNPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWALVQ
>Mature_556_residues
AIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSYHGPDGQ
TVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKARV
SFVPDRGIVDYNQLFTATTLMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYKL
QAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLATPDNYDRSDAPSDGIEQLIFA
PQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGYQ
GPNARLAVNVGVITKACAPAGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGYS
NPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWALVQ

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd. [C]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.bovis Mb2616c and M.leprae ML0489 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57901; Mature: 57770

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAAS
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECC
AGAQAFARTLVGFSYHGPDGQTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCD
CCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEECCCCCCCHH
DIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKARVSFVPDRGIVDYNQLFTATT
HEEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
LMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYK
HCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEE
LQAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLA
EEEEECCCEEEEEECCCCCCHHHHCEEEEECCCCCCHHHHHCCCCEEEEEEEECCCCCCC
TPDNYDRSDAPSDGIEQLIFAPQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPA
CCCCCCCCCCCCHHHHHHEECCCCCCCCCCHHCEEEECCCHHHHHHCCCCCCCCCCCCCC
VDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGYQGPNARLAVNVGVITKACAP
HHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEECEEECCCCC
AGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGY
CCCEEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
SNPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKN
CCCCHHHHHEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCHHCCCEEEEEEEEEEECCC
PTRWGAGWNMDRWALVQ
CCCCCCCCCCCCEEECC
>Mature Secondary Structure 
AIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAAS
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECC
AGAQAFARTLVGFSYHGPDGQTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCD
CCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEECCCCCCCHH
DIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKARVSFVPDRGIVDYNQLFTATT
HEEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
LMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYK
HCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEE
LQAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLA
EEEEECCCEEEEEECCCCCCHHHHCEEEEECCCCCCHHHHHCCCCEEEEEEEECCCCCCC
TPDNYDRSDAPSDGIEQLIFAPQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPA
CCCCCCCCCCCCHHHHHHEECCCCCCCCCCHHCEEEECCCHHHHHHCCCCCCCCCCCCCC
VDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGYQGPNARLAVNVGVITKACAP
HHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEECEEECCCCC
AGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGY
CCCEEEEEEECCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
SNPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKN
CCCCHHHHHEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCHHCCCEEEEEEEEEEECCC
PTRWGAGWNMDRWALVQ
CCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]