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The map label for this gene is lpqU

Identifier: 41407087

GI number: 41407087

Start: 1030385

End: 1031179

Strand: Direct

Name: lpqU

Synonym: MAP0989

Alternate gene names: NA

Gene position: 1030385-1031179 (Clockwise)

Preceding gene: 41407086

Following gene: 41407088

Centisome position: 21.33

GC content: 71.07

Gene sequence:

>795_bases
ATGCATGGGACGATGGTGGGGCGGAAGTTGGTGCAGGCGAGTTTTAGGGGAGCTCAGGAAAGCATGGTGTCGCCGAGGCG
TTGGATGCGCGCGGCCGCCGTGATCGGCGCGACCGCGATCGTGCTGGCCTCCAGCTGCACCTGGCAGCTCAGCCTGTTCA
TCCCCGACGGCGTCCCGCCGCCGGCCGGCGACCCGGTGCCCCCGGTGGACACCCACGCCAGCGGTCGACCCGCGGATCAG
TTGCGCGACTGGGCCGCGCAGCGCGCGGCCGGATTGGAGATCCCGGTCATCGCGCTCGAGGCCTACGCGTACGCGGCGCG
GGTCGCCGAGGTCGAGAACCCGAAGTGCCACATCGCCTGGACCACGCTGGCGGGCATCGGGCAGGTGGAGAGCCACCACG
GCACCTACCGCGGCGCGCGGCTGGCGCCCAACGGCGATGTGAGCCCCCCGATTCGGGGTGTCCGCCTGGACGGCAGCGGC
GGCACGCTGCGCATCGTCGACAACGACGAGGACGTCACGGACGAGGACGGCGTGACGCGCGCGATGGGGCCGATGCAGTT
CATCCCGGAGACCTGGCGGCTCTACGCGGTCGACGCTCACAACGACGGCCGGGTCAGCCCGGACAACATCGACGACGCCG
CGCTCGCCGCGGCGGGTTATCTGTGTTGGCGCGGAAAGGATCTCGCCACACCGCGCGGGTGGATCACCGCGCTGCGCGCC
TACAACAACTCCGGTGTCTACGCCCGGGCGGTGCGCGATTGGGCGACCGCTTACGCCAAAGGTCACCCGCTGTAG

Upstream 100 bases:

>100_bases
CTGACCGCGCTAGCCAAGGTGACCGTCAGCTAATCGACGATTAGCTGAACGCGGCGACAAATCGGTGCCCGCGGGCCCGG
CGCAACCGAGCGGTCCCGGA

Downstream 100 bases:

>100_bases
CAGGATGTATCGCTGACGACGAGTGCACGCACCGGCTACGGATACAAGGAGAACTCAGTGCCGATTATCGAGCAGGTCGG
GGCCCGCGAGATCCTCGACT

Product: LpqU

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LpqU Protein; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; Membrane-Bound Lytic Murein Transglycosylase; NLP/P60 Protein; Cell Wall-Associated Hydrolase Invasion-Associated Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MHGTMVGRKLVQASFRGAQESMVSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQ
LRDWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLAPNGDVSPPIRGVRLDGSG
GTLRIVDNDEDVTDEDGVTRAMGPMQFIPETWRLYAVDAHNDGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRA
YNNSGVYARAVRDWATAYAKGHPL

Sequences:

>Translated_264_residues
MHGTMVGRKLVQASFRGAQESMVSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQ
LRDWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLAPNGDVSPPIRGVRLDGSG
GTLRIVDNDEDVTDEDGVTRAMGPMQFIPETWRLYAVDAHNDGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRA
YNNSGVYARAVRDWATAYAKGHPL
>Mature_264_residues
MHGTMVGRKLVQASFRGAQESMVSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQ
LRDWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLAPNGDVSPPIRGVRLDGSG
GTLRIVDNDEDVTDEDGVTRAMGPMQFIPETWRLYAVDAHNDGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRA
YNNSGVYARAVRDWATAYAKGHPL

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28314; Mature: 28314

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGTMVGRKLVQASFRGAQESMVSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPP
CCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
PAGDPVPPVDTHASGRPADQLRDWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAW
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEE
TTLAGIGQVESHHGTYRGARLAPNGDVSPPIRGVRLDGSGGTLRIVDNDEDVTDEDGVTR
EECCCCCCHHHCCCCCCCCEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHH
AMGPMQFIPETWRLYAVDAHNDGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRA
HCCCHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
YNNSGVYARAVRDWATAYAKGHPL
HCCCCEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHGTMVGRKLVQASFRGAQESMVSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPP
CCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
PAGDPVPPVDTHASGRPADQLRDWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAW
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEE
TTLAGIGQVESHHGTYRGARLAPNGDVSPPIRGVRLDGSGGTLRIVDNDEDVTDEDGVTR
EECCCCCCHHHCCCCCCCCEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHH
AMGPMQFIPETWRLYAVDAHNDGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRA
HCCCHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
YNNSGVYARAVRDWATAYAKGHPL
HCCCCEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA