Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407002

Identifier: 41407002

GI number: 41407002

Start: 933505

End: 934245

Strand: Direct

Name: 41407002

Synonym: MAP0904

Alternate gene names: NA

Gene position: 933505-934245 (Clockwise)

Preceding gene: 41407001

Following gene: 41407003

Centisome position: 19.33

GC content: 65.18

Gene sequence:

>741_bases
ATGCCGGTGATGGGGGTCACAAACGCGTCGATTCTCAGTACGATGCGTTCGGGGGAGGACCCGACGGCCCCTGCGAGTTT
CCTCCTTTCCTTTCGGGCGGTCGCGGATCGACCTACCTTCCCTTTTCGATACACGGACGGCTGGTCCCGTCCATTTTCGA
GAGGAATTGAAATGCGCGAGATTACGAAACGAACGGCTGCTTTCTCCGTTGCGCTTGCGGCCTTCGCGCTGATCGGTGGG
GCGTGCAGCAAGTCGAACAACGCCGGGCAGACAACCAGCTCGGCGAGTTCGTCGGCGACCTCCTCGGCGACCTCGGGAAC
CTCGGCGAGCGCGGCGCCGTCGGAAAGCACGGGCACCAGCGGCGCCCCGAGTTCGACGCAGATCAACGGCGCCAACGGCA
CCCCGTACACCGTCGAGGGGCCGATCCTGGCCAAGTACAACGCCCTCGACGACAAGGCGCGCAAGGACTTGGGCGCCCCG
ACGGGCAACGAGCAGAAGAACCCGGACGGCGGCGTCTACCAGCAATTCGACGGCGGCGTGATCGTTTCCAAGACGCAGGC
TTACGTGGTGTGGGGCAAGATCCGCGACAAGTGGAACCAGCTGGGCGGGTCGCAGGGCCAGTTGGGTTACCCGACCAGCG
ACGAGGTGGACACCCCCGACGGCGCGAAGAAGTCGACGTTCGAGCACGGCACCATCACCTGGAAGCCGGGTGACGCCGAG
GCCACCGTCACCACCGGTTAG

Upstream 100 bases:

>100_bases
GTCGGTGCGCGACGACGAGGTGACCGCGGCCGCCGCCAACGCCGGCATCACGCTGTATCTCACCGGGGCGCGTCACTTCG
CCCACTAGCGATTGGCCGCG

Downstream 100 bases:

>100_bases
GTACGCCGCGAAGGCCGGGCGTCCCCACGATGCCCGGCCTTCGTGTCGGCACGCAGTGAACGCCCTTCGGATGACGCGTC
TGGGCGCTCGTCGTAGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPVMGVTNASILSTMRSGEDPTAPASFLLSFRAVADRPTFPFRYTDGWSRPFSRGIEMREITKRTAAFSVALAAFALIGG
ACSKSNNAGQTTSSASSSATSSATSGTSASAAPSESTGTSGAPSSTQINGANGTPYTVEGPILAKYNALDDKARKDLGAP
TGNEQKNPDGGVYQQFDGGVIVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKSTFEHGTITWKPGDAE
ATVTTG

Sequences:

>Translated_246_residues
MPVMGVTNASILSTMRSGEDPTAPASFLLSFRAVADRPTFPFRYTDGWSRPFSRGIEMREITKRTAAFSVALAAFALIGG
ACSKSNNAGQTTSSASSSATSSATSGTSASAAPSESTGTSGAPSSTQINGANGTPYTVEGPILAKYNALDDKARKDLGAP
TGNEQKNPDGGVYQQFDGGVIVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKSTFEHGTITWKPGDAE
ATVTTG
>Mature_245_residues
PVMGVTNASILSTMRSGEDPTAPASFLLSFRAVADRPTFPFRYTDGWSRPFSRGIEMREITKRTAAFSVALAAFALIGGA
CSKSNNAGQTTSSASSSATSSATSGTSASAAPSESTGTSGAPSSTQINGANGTPYTVEGPILAKYNALDDKARKDLGAPT
GNEQKNPDGGVYQQFDGGVIVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKSTFEHGTITWKPGDAEA
TVTTG

Specific function: Unknown

COG id: COG5479

COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25480; Mature: 25349

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVMGVTNASILSTMRSGEDPTAPASFLLSFRAVADRPTFPFRYTDGWSRPFSRGIEMRE
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCHHHH
ITKRTAAFSVALAAFALIGGACSKSNNAGQTTSSASSSATSSATSGTSASAAPSESTGTS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAPSSTQINGANGTPYTVEGPILAKYNALDDKARKDLGAPTGNEQKNPDGGVYQQFDGGV
CCCCCCEEECCCCCCEEECCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCE
IVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKSTFEHGTITWKPGDAE
EEECCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
ATVTTG
EEEECC
>Mature Secondary Structure 
PVMGVTNASILSTMRSGEDPTAPASFLLSFRAVADRPTFPFRYTDGWSRPFSRGIEMRE
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCHHHH
ITKRTAAFSVALAAFALIGGACSKSNNAGQTTSSASSSATSSATSGTSASAAPSESTGTS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAPSSTQINGANGTPYTVEGPILAKYNALDDKARKDLGAPTGNEQKNPDGGVYQQFDGGV
CCCCCCEEECCCCCCEEECCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCE
IVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKSTFEHGTITWKPGDAE
EEECCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
ATVTTG
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA