| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406999
Identifier: 41406999
GI number: 41406999
Start: 929695
End: 931095
Strand: Direct
Name: 41406999
Synonym: MAP0901
Alternate gene names: NA
Gene position: 929695-931095 (Clockwise)
Preceding gene: 41406998
Following gene: 41407000
Centisome position: 19.25
GC content: 71.88
Gene sequence:
>1401_bases GTGACACGGGTGGAGGACAACCGGGCAGCGGGCGCTCGCCAGGCGCGTGACCTCGTCAGGGTCGCGTTCGCCCCGGCGGT GGTGGCACTGGTCATCATCGCCGCGGTCACGCTGATCCAGTTGTTGATCGCCAACAGCGACATGACCGGCGCGTTGGGCG CCATCGCCAGCATGTGGCTGGGCGTGCACCAGGTGCCGGTGTCGATCGGCGGCCGCGAACTGGGTGTGCTGCCGCTGCTG CCGGTGTTGCTGATGGTGTGGGCCACGGCGCGCAACACCGCGCGGGCCACCTCGCCGCACTCGTCGTGGTTGGTCATTCG CTGGGTGGTTGCCTCGGCGCTGGGTGGCCCGTTGTTGATGACGGCGGTCGCGCTGGCCGTCATCCACGACGCGTCGTCGG TGATCACCGAGTTGCAGACGCCCAGCGCGCTGCGGGCATTTCTGAGCGTGCTCGTGGTGCATGCCATCGGCGCCGGGATC GGGGTGTGGTCGCAGGTCGGGCCGCGCGCCCTGGCGGCGTCGTCGCTGCCCTATTGGCTGGGTGATTCGTTGCGCGCCGC GACCGCCGGCGTCCTGGCGCTGCTCGGGCTGTCCGGCTTCGTGACCGCCGGGTCGCTGGTGGTGCATTGGGCGACCATGC AGGAGCTCTACGGGATCACCGATTCGATCTTCGGCGAGTTCAGCCTCACCGTGTTGTCAATGCTGTACGCCCCCAACGTC ATTGTGGGCACCGCGGCGGTGGCCGTCGGGTCCAGCGCGCACATCGGTTTCGCGACGTTCAGTTCGTTCACCGTGTTCGG CGGGGACATCCCGGCGTTGCCGGTGCTCGCCGCCGTGCCCCGGCCGCCGCTGGGACCGGTGTGGGTTGCGCTGCTCATCA TCGGGGCGTCGTCGGGCGTGGCGGTCGGGCAGCAGTGCGCGCGGCGCCCGCTGCCGCCCGTTGCCGCGATGGTCAAACTG CTGGCCGCCTCGGTGGCCGGGGCGTTGGTGATGTCGCTGCTCGCCTTCGCCGGCAGCGGCCAGCTGGGCAACTTCGGGCC CGTCGGCGTGGACCAGGGTGCGCTGTTGGTCGGGGTCTTCTTCTGGTTCGCGGTGGTCGGCGGGGCCACGGTGGTGATGA GCGGCGGGATCCGGCGCCCCACCCGACGGCTCAAGCCGCGCCCCGCGCCCGCGGCGCCGGTGGCCGAGGAGCACGATTCC GTCTTCGGCGAGGCGGTCGGGCCCGTTGGTGACGTTGCGGGCGTCGACGAGGTTGCGGTGGAGGGTGTCGACGAGGTTGC GGCGGGGGGTGTCGACGAATCCCCGGGCGATGCGGGCGAGCGTGAGGGTGACGAGGGTGATCCCGGGGAGCGCGGGCCGG GCGACGCGGGCGATGCGGGCGAGCGCCGGCCCGGGGAATAG
Upstream 100 bases:
>100_bases GCCGGTGGCCAGCAGTCCTACGGCCAGGAGCCTTCTTCACCGTCTGGGCCGACGCCCGCCTAACGTGCCCTGTCGCGCCT AGTCGGGAACGTGCCCCAGA
Downstream 100 bases:
>100_bases GAACTTTGCCCGCCTCTGAGCGACAACGACGCGTCGGGGGATCGGACTTCGGTGATTGTCGCTCAGAGGCGGGCACTTCC CATGTGCCCCGCCGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTRVEDNRAAGARQARDLVRVAFAPAVVALVIIAAVTLIQLLIANSDMTGALGAIASMWLGVHQVPVSIGGRELGVLPLL PVLLMVWATARNTARATSPHSSWLVIRWVVASALGGPLLMTAVALAVIHDASSVITELQTPSALRAFLSVLVVHAIGAGI GVWSQVGPRALAASSLPYWLGDSLRAATAGVLALLGLSGFVTAGSLVVHWATMQELYGITDSIFGEFSLTVLSMLYAPNV IVGTAAVAVGSSAHIGFATFSSFTVFGGDIPALPVLAAVPRPPLGPVWVALLIIGASSGVAVGQQCARRPLPPVAAMVKL LAASVAGALVMSLLAFAGSGQLGNFGPVGVDQGALLVGVFFWFAVVGGATVVMSGGIRRPTRRLKPRPAPAAPVAEEHDS VFGEAVGPVGDVAGVDEVAVEGVDEVAAGGVDESPGDAGEREGDEGDPGERGPGDAGDAGERRPGE
Sequences:
>Translated_466_residues MTRVEDNRAAGARQARDLVRVAFAPAVVALVIIAAVTLIQLLIANSDMTGALGAIASMWLGVHQVPVSIGGRELGVLPLL PVLLMVWATARNTARATSPHSSWLVIRWVVASALGGPLLMTAVALAVIHDASSVITELQTPSALRAFLSVLVVHAIGAGI GVWSQVGPRALAASSLPYWLGDSLRAATAGVLALLGLSGFVTAGSLVVHWATMQELYGITDSIFGEFSLTVLSMLYAPNV IVGTAAVAVGSSAHIGFATFSSFTVFGGDIPALPVLAAVPRPPLGPVWVALLIIGASSGVAVGQQCARRPLPPVAAMVKL LAASVAGALVMSLLAFAGSGQLGNFGPVGVDQGALLVGVFFWFAVVGGATVVMSGGIRRPTRRLKPRPAPAAPVAEEHDS VFGEAVGPVGDVAGVDEVAVEGVDEVAAGGVDESPGDAGEREGDEGDPGERGPGDAGDAGERRPGE >Mature_465_residues TRVEDNRAAGARQARDLVRVAFAPAVVALVIIAAVTLIQLLIANSDMTGALGAIASMWLGVHQVPVSIGGRELGVLPLLP VLLMVWATARNTARATSPHSSWLVIRWVVASALGGPLLMTAVALAVIHDASSVITELQTPSALRAFLSVLVVHAIGAGIG VWSQVGPRALAASSLPYWLGDSLRAATAGVLALLGLSGFVTAGSLVVHWATMQELYGITDSIFGEFSLTVLSMLYAPNVI VGTAAVAVGSSAHIGFATFSSFTVFGGDIPALPVLAAVPRPPLGPVWVALLIIGASSGVAVGQQCARRPLPPVAAMVKLL AASVAGALVMSLLAFAGSGQLGNFGPVGVDQGALLVGVFFWFAVVGGATVVMSGGIRRPTRRLKPRPAPAAPVAEEHDSV FGEAVGPVGDVAGVDEVAVEGVDEVAAGGVDESPGDAGEREGDEGDPGERGPGDAGDAGERRPGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47191; Mature: 47060
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVEDNRAAGARQARDLVRVAFAPAVVALVIIAAVTLIQLLIANSDMTGALGAIASMWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GVHQVPVSIGGRELGVLPLLPVLLMVWATARNTARATSPHSSWLVIRWVVASALGGPLLM HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH TAVALAVIHDASSVITELQTPSALRAFLSVLVVHAIGAGIGVWSQVGPRALAASSLPYWL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCHHH GDSLRAATAGVLALLGLSGFVTAGSLVVHWATMQELYGITDSIFGEFSLTVLSMLYAPNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH IVGTAAVAVGSSAHIGFATFSSFTVFGGDIPALPVLAAVPRPPLGPVWVALLIIGASSGV HHHHHHHHCCCCCCCCHHHHCCCEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCH AVGQQCARRPLPPVAAMVKLLAASVAGALVMSLLAFAGSGQLGNFGPVGVDQGALLVGVF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH FWFAVVGGATVVMSGGIRRPTRRLKPRPAPAAPVAEEHDSVFGEAVGPVGDVAGVDEVAV HHHHHHCCHHEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH EGVDEVAAGGVDESPGDAGEREGDEGDPGERGPGDAGDAGERRPGE HCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRVEDNRAAGARQARDLVRVAFAPAVVALVIIAAVTLIQLLIANSDMTGALGAIASMWL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GVHQVPVSIGGRELGVLPLLPVLLMVWATARNTARATSPHSSWLVIRWVVASALGGPLLM HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH TAVALAVIHDASSVITELQTPSALRAFLSVLVVHAIGAGIGVWSQVGPRALAASSLPYWL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCHHH GDSLRAATAGVLALLGLSGFVTAGSLVVHWATMQELYGITDSIFGEFSLTVLSMLYAPNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH IVGTAAVAVGSSAHIGFATFSSFTVFGGDIPALPVLAAVPRPPLGPVWVALLIIGASSGV HHHHHHHHCCCCCCCCHHHHCCCEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCH AVGQQCARRPLPPVAAMVKLLAASVAGALVMSLLAFAGSGQLGNFGPVGVDQGALLVGVF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH FWFAVVGGATVVMSGGIRRPTRRLKPRPAPAAPVAEEHDSVFGEAVGPVGDVAGVDEVAV HHHHHHCCHHEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH EGVDEVAAGGVDESPGDAGEREGDEGDPGERGPGDAGDAGERRPGE HCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]