Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406956

Identifier: 41406956

GI number: 41406956

Start: 881207

End: 881755

Strand: Direct

Name: 41406956

Synonym: MAP0858

Alternate gene names: NA

Gene position: 881207-881755 (Clockwise)

Preceding gene: 41406953

Following gene: 41406959

Centisome position: 18.25

GC content: 61.02

Gene sequence:

>549_bases
GTGCGCTGGACACGGCGCAAGCCGAGGTCACAGACGCTGACATTCGCGATCGAAGCCAGGTGCCGGGAGTGCCACTACAA
GGCGACGGAGCGTGCAAAGGTCACTACATATCCGGCCGAACGCGTCGCTGATCAGCTTCGGCCAACGCCGCCTGCAGTGC
CGTCAAAATTCGGCGGGTTGTGGATCCTCGCTGTGGTTTCGGCGTCCAACTCGTCGACACCGGCGATTAGCCCTTCAGCA
AAGTGCTCCCGGAGCGCGGCGGTCTGCCAATCGTCGTCGACAGCGCCGTGCATCCGCTTACGCAGTTCGAGGCCCAGTTG
GTCGCGAGCGGATTGTTCACTTGCGCCGCTGACGTCCCATTCCGCGCCAGGGTATCGCGCCGTCCATGATCGGTCTTCGT
ACTCCGCAGTTTGCGGGACGAACGCGAAGGCTCTCCCAGTGGTGCGCATGAAGTCTTCCAAATTCGTGCTGCGGTCTTCG
GTATTTGCCATCAGTTGTCCCCTGCGACATCCGTGCGATCTTTCTGAATTAACTCGGCGATCACGTTGA

Upstream 100 bases:

>100_bases
CGCCGTGTTGTGGAGCCGCGGCTCGGCTGGTGACTATGTGGTGTTCGTCGGCGTGATGCCGATCGCGAGGTAGGGGCGCA
CCCAACCGACCAGTGACGTA

Downstream 100 bases:

>100_bases
GCGATACAGGCGAAAGACCCCACGCATCAAGGCCAACATGGATGGTGCGGCCAGCGAGTCGCCGTGAACTGTGGATATGA
CCGTGCAGCAGCCATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA
KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS
VFAISCPLRHPCDLSELTRRSR

Sequences:

>Translated_182_residues
MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA
KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS
VFAISCPLRHPCDLSELTRRSR
>Mature_182_residues
MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA
KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS
VFAISCPLRHPCDLSELTRRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19925; Mature: 19925

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGL
CCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCE
WILAVVSASNSSTPAISPSAKCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSH
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCC
SAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSSVFAISCPLRHPCDLSELTRR
CCCCCCEECCCCCCCEEECCCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCHHHHHHC
SR
CC
>Mature Secondary Structure
MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGL
CCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCE
WILAVVSASNSSTPAISPSAKCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSH
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCC
SAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSSVFAISCPLRHPCDLSELTRR
CCCCCCEECCCCCCCEEECCCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCHHHHHHC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA