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The map label for this gene is yjfH [C]

Identifier: 41406918

GI number: 41406918

Start: 837073

End: 837942

Strand: Direct

Name: yjfH [C]

Synonym: MAP0820

Alternate gene names: 41406918

Gene position: 837073-837942 (Clockwise)

Preceding gene: 41406917

Following gene: 41406919

Centisome position: 17.33

GC content: 72.76

Gene sequence:

>870_bases
GTGAACACCGATGCGCTGGACGTTCGCGACGTTGACGACCCCGACGACCCGAGGCTCGACGACTTCCGCGACCTGAACAG
TGTCGATCGGCGTCCCGATCTGCCGTCGGGCAAGGGGCTGGTGATCGCGGAAGGCGTGCTGGTGGTGCAGCGCATGCTGG
CGTCCCGGTTCCGCCCGCACGCCCTGCTGGGGACCGAGCGCCGGCTCGCCGAGCTGCGCGACGACCTGGCCGGCGTCCCG
GTGCCGTACTACCGAACGTCGGCCGACGTGATGGCGCGGGTGGTCGGCTTTCACCTCAACCGCGGGGTGCTGGCGGCCGC
CCGGCGGGTGCCGGAGCCCGGCGTCGCCGAGCTGCTGGCCGGCAGCCGCACCGTCGCGGTGCTCGAGGGGGTCAACGATC
ATGAGAACCTGGGCGCGATCTTCCGCAACGCGGCGGGGCTGGGCGTCGACGCGGTGATCTTCGGCAGTGGCTGCGCCGAC
CCGTTGTACCGCCGCGCCGTCCGGGTGTCGATGGGTCATGCGCTGCTGGTGCCGTACGCCCGCGCAACCGACTGGCCCGC
CGAGCTGAAGACGTTGAAGGAGAATGGATTTCGGCTGCTGGCGATGACGCCGCAGGGTTCCGCGTGCGGCTTGGCCGAGG
CGATGACGGCGGCCCGCGGCGACCGCGTGGCGGTGTTGGTGGGTGCCGAGGGCCCGGGGCTGACGCCGGCCGCGCTGCGG
TTGAGCGATGTGCGGGTGCGCATCCCGATGTCGCGGGGCACCGACTCGCTCAATGTCGCGACGGCGGCCGCGCTGGCGTT
CTACGAGCGGTCTCGCCCGGTCGGGGTGCACCGCGCGGCGGCCGGAGGCGGAGATGGACAGTCGGGCTAG

Upstream 100 bases:

>100_bases
AGGAGTGGTTGGCCAAGCGGCTGTCCACGCTGGACGACGACGAGCGCGAAACCCTGCGCCACGCGGCCGATCTGATGCTG
GCCCTGGTCGACGAAGGCCC

Downstream 100 bases:

>100_bases
GCTGCGGCTGATGAAGGACGAGACCGTGCCCTGGGCAACGGGTTTGACGGTGACCGCGTTTGTCGCGGCGGTCACCGGCG
TCGCGATCGTGGTGCTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNTDALDVRDVDDPDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPHALLGTERRLAELRDDLAGVP
VPYYRTSADVMARVVGFHLNRGVLAAARRVPEPGVAELLAGSRTVAVLEGVNDHENLGAIFRNAAGLGVDAVIFGSGCAD
PLYRRAVRVSMGHALLVPYARATDWPAELKTLKENGFRLLAMTPQGSACGLAEAMTAARGDRVAVLVGAEGPGLTPAALR
LSDVRVRIPMSRGTDSLNVATAAALAFYERSRPVGVHRAAAGGGDGQSG

Sequences:

>Translated_289_residues
MNTDALDVRDVDDPDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPHALLGTERRLAELRDDLAGVP
VPYYRTSADVMARVVGFHLNRGVLAAARRVPEPGVAELLAGSRTVAVLEGVNDHENLGAIFRNAAGLGVDAVIFGSGCAD
PLYRRAVRVSMGHALLVPYARATDWPAELKTLKENGFRLLAMTPQGSACGLAEAMTAARGDRVAVLVGAEGPGLTPAALR
LSDVRVRIPMSRGTDSLNVATAAALAFYERSRPVGVHRAAAGGGDGQSG
>Mature_289_residues
MNTDALDVRDVDDPDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPHALLGTERRLAELRDDLAGVP
VPYYRTSADVMARVVGFHLNRGVLAAARRVPEPGVAELLAGSRTVAVLEGVNDHENLGAIFRNAAGLGVDAVIFGSGCAD
PLYRRAVRVSMGHALLVPYARATDWPAELKTLKENGFRLLAMTPQGSACGLAEAMTAARGDRVAVLVGAEGPGLTPAALR
LSDVRVRIPMSRGTDSLNVATAAALAFYERSRPVGVHRAAAGGGDGQSG

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1790623, Length=146, Percent_Identity=31.5068493150685, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 30589; Mature: 30589

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDALDVRDVDDPDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
ALLGTERRLAELRDDLAGVPVPYYRTSADVMARVVGFHLNRGVLAAARRVPEPGVAELLA
HHHCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHC
GSRTVAVLEGVNDHENLGAIFRNAAGLGVDAVIFGSGCADPLYRRAVRVSMGHALLVPYA
CCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECC
RATDWPAELKTLKENGFRLLAMTPQGSACGLAEAMTAARGDRVAVLVGAEGPGLTPAALR
CCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHEE
LSDVRVRIPMSRGTDSLNVATAAALAFYERSRPVGVHRAAAGGGDGQSG
EECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MNTDALDVRDVDDPDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
ALLGTERRLAELRDDLAGVPVPYYRTSADVMARVVGFHLNRGVLAAARRVPEPGVAELLA
HHHCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHC
GSRTVAVLEGVNDHENLGAIFRNAAGLGVDAVIFGSGCADPLYRRAVRVSMGHALLVPYA
CCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECC
RATDWPAELKTLKENGFRLLAMTPQGSACGLAEAMTAARGDRVAVLVGAEGPGLTPAALR
CCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHEE
LSDVRVRIPMSRGTDSLNVATAAALAFYERSRPVGVHRAAAGGGDGQSG
EECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]