| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406906
Identifier: 41406906
GI number: 41406906
Start: 826952
End: 827428
Strand: Direct
Name: 41406906
Synonym: MAP0808
Alternate gene names: NA
Gene position: 826952-827428 (Clockwise)
Preceding gene: 41406902
Following gene: 41406908
Centisome position: 17.12
GC content: 73.79
Gene sequence:
>477_bases ATGTTGACGCGGTCCAGTCCGGCGCGGGCCAGCCCGGCGGGCCAGTCCCACGCCGTTGGTGGTCAGCGAGATCTCCGGGC GGGGCCGCAGTGCGGCCGCCGCGGCCACCACCTCTTCGAGGTGGCGGGCCAACAGCGGCTCGCCGCCGGTGAACCGCACG CTGGTGACCCCCAACCGGGTGACCGCGATGCGCATCAGCCTGGTCAGCTCGTCGGAGGTCAGCAGCTGTTCGCCGGGCAG CCAGTCGAGGCCCTCGGCGGGCATGCAGTAACTGCACCGCAGGTTGCAGCGATCGGTCAGCGAGATCCGCAGATCGGTGG CGACGCGCCCATAGGTGTCGCGCAGCGGGCCGCTCGACGGCGCCGGCGCGGCAAGCGCGCCGTCGAGCGGCCGGGCCGTC GAAGCGGCTCGGCATGGTCGGCAGACCCAGCGCGGTCAGCGTCATGCGGCCACCGGCGGAGCGTGCGGAACCGGTGA
Upstream 100 bases:
>100_bases ACCCGCTTCTTTGGCGGCGGCCAAGCCGGCCAGCACGTCGGCGAGCCGGTCGCGGCGGGTGATGGCCGCAAAATGTTCCC GGTCCACGCTGTCCAGCGAG
Downstream 100 bases:
>100_bases GCCGACCGGGACGATCTGCTTGCCCAGCGGCATCAGCGACACCGGAATCAGTTTCAGGTTGGCCAGTGCGAGCGGGATGC CGACGATCGTCAGCGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MLTRSSPARASPAGQSHAVGGQRDLRAGPQCGRRGHHLFEVAGQQRLAAGEPHAGDPQPGDRDAHQPGQLVGGQQLFAGQ PVEALGGHAVTAPQVAAIGQRDPQIGGDAPIGVAQRAARRRRRGKRAVERPGRRSGSAWSADPARSASCGHRRSVRNR
Sequences:
>Translated_158_residues MLTRSSPARASPAGQSHAVGGQRDLRAGPQCGRRGHHLFEVAGQQRLAAGEPHAGDPQPGDRDAHQPGQLVGGQQLFAGQ PVEALGGHAVTAPQVAAIGQRDPQIGGDAPIGVAQRAARRRRRGKRAVERPGRRSGSAWSADPARSASCGHRRSVRNR >Mature_158_residues MLTRSSPARASPAGQSHAVGGQRDLRAGPQCGRRGHHLFEVAGQQRLAAGEPHAGDPQPGDRDAHQPGQLVGGQQLFAGQ PVEALGGHAVTAPQVAAIGQRDPQIGGDAPIGVAQRAARRRRRGKRAVERPGRRSGSAWSADPARSASCGHRRSVRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16537; Mature: 16537
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRSSPARASPAGQSHAVGGQRDLRAGPQCGRRGHHLFEVAGQQRLAAGEPHAGDPQPG CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC DRDAHQPGQLVGGQQLFAGQPVEALGGHAVTAPQVAAIGQRDPQIGGDAPIGVAQRAARR CCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH RRRGKRAVERPGRRSGSAWSADPARSASCGHRRSVRNR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MLTRSSPARASPAGQSHAVGGQRDLRAGPQCGRRGHHLFEVAGQQRLAAGEPHAGDPQPG CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC DRDAHQPGQLVGGQQLFAGQPVEALGGHAVTAPQVAAIGQRDPQIGGDAPIGVAQRAARR CCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH RRRGKRAVERPGRRSGSAWSADPARSASCGHRRSVRNR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA