Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406885

Identifier: 41406885

GI number: 41406885

Start: 807096

End: 807551

Strand: Direct

Name: 41406885

Synonym: MAP0787

Alternate gene names: NA

Gene position: 807096-807551 (Clockwise)

Preceding gene: 41406884

Following gene: 41406887

Centisome position: 16.71

GC content: 67.54

Gene sequence:

>456_bases
GTGGCCGTGCAAGCGTCGTCGGAAATCGTCATCGACGCGCCTCCGGAGGTGATCATGGAGGCGCTCGCCGACATGGACGC
GGTGCCGTCGTGGTCGTCGGTGCACAAGCGGGTCGAGGTCATCGACAAGCATCCCGACGGCAGGCCGCACCACGTGCGGG
TCACGATCGCGGTGGTCGGAATCCATGACACCGAACTGCTCGAATACCACTGGGGCCCCGACTGGATGGTGTGGGACGCC
GACAGGACGGCCCAGCAACACGGTCAGCACGGCGAGTACAACCTGAGCCGGCTCGGCGACGACAAGACCCGGGTGCGCTT
CACCATCACGGTCGAACCGTGGGTGCCGCTACCGGAGTTCTGGGTCAGGCGGGCCCGCAAGAAGATCCTGCACGCCGCGC
TGGAGGGGCTGCGCAAGCGGGTGATGACGCCGGAGGCGTTCGGCCGGGCTGACTGA

Upstream 100 bases:

>100_bases
GGCGAGCGAGAACGTCCTCGACGCCGCAATGAAGGGATTGCAGGAATTGGTGATGCGCGCCAAGGATTTGAGGGATTCGG
GGGAGGCGGAATAGTCGGCC

Downstream 100 bases:

>100_bases
CTTAGCCGGCGCCGCGCAGCGCGGCCAGCCGCCGGATCGCCTCGTCGAGGGTGTCGTCGCGTTTACAGAAGGTGAAGCGC
ACCAAGTGATTCCACACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Polyketide Cyclase/Dehydrase; Cyclase; Polyketide Cyclase / Dehydrase Family Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDA
DRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD

Sequences:

>Translated_151_residues
MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDA
DRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD
>Mature_150_residues
AVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDAD
RTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17283; Mature: 17152

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG
CCCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF
CCCCEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCHHH
WVRRARKKILHAALEGLRKRVMTPEAFGRAD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG
CCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF
CCCCEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCHHH
WVRRARKKILHAALEGLRKRVMTPEAFGRAD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA