Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 41406846

GI number: 41406846

Start: 769898

End: 771073

Strand: Direct

Name: yngJ [H]

Synonym: MAP0748

Alternate gene names: 41406846

Gene position: 769898-771073 (Clockwise)

Preceding gene: 41406845

Following gene: 41406853

Centisome position: 15.94

GC content: 67.52

Gene sequence:

>1176_bases
GTGCAGCTGACTTTTGATCCCGACGTCGAGGCGTTCCGCGCCGAGTTCGCGGCGTTCCTGGACGAAAACCTGCCCCCGGC
AAGCGAAACCCTGGACCGTCCGCGATCGGTCTCGCACATGCCCCAGTGGGCGCGCCGCTGGCAACGGCTGCTGTTCGACA
ACGGCTGGCTGCTGCCCAGCCAGCCGCCGGAGTACGGCGGCCGCAACGCCACGGTGCTGCAACAGTTCGTCTATCTCGAG
GAACTCAGCCGCCGCCGGATCTACCACAGCTTCAACCCGCAGGGCGTGAATATCGTTGCGGCATCGCTGTTGTCGTTCGG
CAGCGACGAACAAAAGCAGCGCTGGGCGGTGCCGATCCTGCGCGCCGAGATCACCGCGTCGCTGGGCATGAGCGAGCCCA
GCGCCGGTTCGGATCTCGCCTCGCTGCGCACCCGCGCGGTGCTGGACGGCGACCACTTCGTGGTCAACGGACAAAAAGTG
TGGACCTCCGGGGCGCATGACGCCGACGTCCTGCTGACCTTCGTGCGAACCGATCCAGATGCGCTCAAGCACAAGGGAAT
CAGCGCCCTGGTGATCCCCACCGACACCCCGGGCCTGGTCCGCCGGCCCTTCCCGTCGATCTGTTCGATCGACGACAAGG
ACTTCAACGAGGTGTTCTTCACCGACGTGCGGGTGCCGGCCGAGAACCTGGTCGGTGAACTCAACCAAGGGTGGCTGGTG
GCCAACGGTTCGCTGGGTCACGAGCGCACCATGATGTGGCTGGGGTTCGCGGACCGCCTGGAGAACATGATCGCCGACTT
CCAGCCCGGCACCGAGGTGGAGCGCGACCAGTACGCCACCACGATCATGGACAGACAGGCGCTGCGGCTGCTCGGCTCGG
CGGCGCTGGCCCGCGCCGCCCGCGGCGAAGACGACGTTGCCGCCATCTCGGTGCTCAAGCTGCTCGGTTCGGAAGCCGAG
CTGCGCGCCATGGAACTGGCGCTCACCTCCGCGGGCGCCGACGGACTCGTGCACCCCGGGCAGACCGGGCCGTACGCGCA
CATGAACCTCGACCACTACTTCGCCAGCTGGTTCGAGCGCTACGCGCGCAGCTTCTCCGGGACCATCGCCGGTGGCACCT
CGGAGATCCAGCGCAACATCATCGCCCAGCGGGTGCTCGGCCTGCCGCGCGGTTAG

Upstream 100 bases:

>100_bases
TGGGAGAATGACCTGCAGTTCGCGCTCAAGCGGGCCAAGGCGGGTGAGCTGATGCTCGGCGGCGCGGCGGAGCACCGGGC
GCGGATCGCAGAGGAATACC

Downstream 100 bases:

>100_bases
CGCCGTCACAGCGCTTGCCGAGAGACGTTGCTGGGCAAGGAAATCCGACTCACCCCCGGAGTGCCCAGCTGGCCGGCCAG
CCACGGCAACGCGGTGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MQLTFDPDVEAFRAEFAAFLDENLPPASETLDRPRSVSHMPQWARRWQRLLFDNGWLLPSQPPEYGGRNATVLQQFVYLE
ELSRRRIYHSFNPQGVNIVAASLLSFGSDEQKQRWAVPILRAEITASLGMSEPSAGSDLASLRTRAVLDGDHFVVNGQKV
WTSGAHDADVLLTFVRTDPDALKHKGISALVIPTDTPGLVRRPFPSICSIDDKDFNEVFFTDVRVPAENLVGELNQGWLV
ANGSLGHERTMMWLGFADRLENMIADFQPGTEVERDQYATTIMDRQALRLLGSAALARAARGEDDVAAISVLKLLGSEAE
LRAMELALTSAGADGLVHPGQTGPYAHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIAQRVLGLPRG

Sequences:

>Translated_391_residues
MQLTFDPDVEAFRAEFAAFLDENLPPASETLDRPRSVSHMPQWARRWQRLLFDNGWLLPSQPPEYGGRNATVLQQFVYLE
ELSRRRIYHSFNPQGVNIVAASLLSFGSDEQKQRWAVPILRAEITASLGMSEPSAGSDLASLRTRAVLDGDHFVVNGQKV
WTSGAHDADVLLTFVRTDPDALKHKGISALVIPTDTPGLVRRPFPSICSIDDKDFNEVFFTDVRVPAENLVGELNQGWLV
ANGSLGHERTMMWLGFADRLENMIADFQPGTEVERDQYATTIMDRQALRLLGSAALARAARGEDDVAAISVLKLLGSEAE
LRAMELALTSAGADGLVHPGQTGPYAHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIAQRVLGLPRG
>Mature_391_residues
MQLTFDPDVEAFRAEFAAFLDENLPPASETLDRPRSVSHMPQWARRWQRLLFDNGWLLPSQPPEYGGRNATVLQQFVYLE
ELSRRRIYHSFNPQGVNIVAASLLSFGSDEQKQRWAVPILRAEITASLGMSEPSAGSDLASLRTRAVLDGDHFVVNGQKV
WTSGAHDADVLLTFVRTDPDALKHKGISALVIPTDTPGLVRRPFPSICSIDDKDFNEVFFTDVRVPAENLVGELNQGWLV
ANGSLGHERTMMWLGFADRLENMIADFQPGTEVERDQYATTIMDRQALRLLGSAALARAARGEDDVAAISVLKLLGSEAE
LRAMELALTSAGADGLVHPGQTGPYAHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIAQRVLGLPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=392, Percent_Identity=26.0204081632653, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI4501859, Length=402, Percent_Identity=27.363184079602, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI226958414, Length=357, Percent_Identity=26.3305322128852, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557233, Length=352, Percent_Identity=30.6818181818182, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI7656849, Length=304, Percent_Identity=29.2763157894737, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI211971008, Length=347, Percent_Identity=27.3775216138329, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI48976061, Length=347, Percent_Identity=27.3775216138329, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI76496475, Length=262, Percent_Identity=30.9160305343511, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557235, Length=262, Percent_Identity=30.9160305343511, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI38505218, Length=285, Percent_Identity=28.7719298245614, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI187960098, Length=293, Percent_Identity=24.9146757679181, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI4557231, Length=293, Percent_Identity=24.9146757679181, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI21361497, Length=169, Percent_Identity=31.3609467455621, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4501857, Length=253, Percent_Identity=25.6916996047431, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI87081958, Length=257, Percent_Identity=25.6809338521401, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=393, Percent_Identity=25.9541984732824, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17570075, Length=411, Percent_Identity=26.0340632603406, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=349, Percent_Identity=27.2206303724928, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=355, Percent_Identity=28.7323943661972, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=243, Percent_Identity=30.0411522633745, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=355, Percent_Identity=27.6056338028169, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI32563615, Length=246, Percent_Identity=28.4552845528455, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=288, Percent_Identity=26.3888888888889, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=244, Percent_Identity=26.6393442622951, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=259, Percent_Identity=24.7104247104247, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=148, Percent_Identity=33.7837837837838, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=148, Percent_Identity=33.7837837837838, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=256, Percent_Identity=26.953125, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=337, Percent_Identity=26.1127596439169, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=313, Percent_Identity=26.1980830670927, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355753, Length=402, Percent_Identity=25.8706467661692, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24666513, Length=292, Percent_Identity=29.4520547945205, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21356377, Length=231, Percent_Identity=30.7359307359307, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI281363737, Length=168, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646207, Length=347, Percent_Identity=28.2420749279539, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24660351, Length=278, Percent_Identity=26.978417266187, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43249; Mature: 43249

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTFDPDVEAFRAEFAAFLDENLPPASETLDRPRSVSHMPQWARRWQRLLFDNGWLLPS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCC
QPPEYGGRNATVLQQFVYLEELSRRRIYHSFNPQGVNIVAASLLSFGSDEQKQRWAVPIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCHHH
RAEITASLGMSEPSAGSDLASLRTRAVLDGDHFVVNGQKVWTSGAHDADVLLTFVRTDPD
HHHHHHHCCCCCCCCCCHHHHHHHHHEECCCEEEECCCEEECCCCCCHHHEEEEECCCHH
ALKHKGISALVIPTDTPGLVRRPFPSICSIDDKDFNEVFFTDVRVPAENLVGELNQGWLV
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEE
ANGSLGHERTMMWLGFADRLENMIADFQPGTEVERDQYATTIMDRQALRLLGSAALARAA
ECCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEDDVAAISVLKLLGSEAELRAMELALTSAGADGLVHPGQTGPYAHMNLDHYFASWFER
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
YARSFSGTIAGGTSEIQRNIIAQRVLGLPRG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLTFDPDVEAFRAEFAAFLDENLPPASETLDRPRSVSHMPQWARRWQRLLFDNGWLLPS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCC
QPPEYGGRNATVLQQFVYLEELSRRRIYHSFNPQGVNIVAASLLSFGSDEQKQRWAVPIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCHHH
RAEITASLGMSEPSAGSDLASLRTRAVLDGDHFVVNGQKVWTSGAHDADVLLTFVRTDPD
HHHHHHHCCCCCCCCCCHHHHHHHHHEECCCEEEECCCEEECCCCCCHHHEEEEECCCHH
ALKHKGISALVIPTDTPGLVRRPFPSICSIDDKDFNEVFFTDVRVPAENLVGELNQGWLV
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEE
ANGSLGHERTMMWLGFADRLENMIADFQPGTEVERDQYATTIMDRQALRLLGSAALARAA
ECCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEDDVAAISVLKLLGSEAELRAMELALTSAGADGLVHPGQTGPYAHMNLDHYFASWFER
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
YARSFSGTIAGGTSEIQRNIIAQRVLGLPRG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]