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The map label for this gene is yngJ [H]

Identifier: 41406845

GI number: 41406845

Start: 768874

End: 769914

Strand: Direct

Name: yngJ [H]

Synonym: MAP0747

Alternate gene names: 41406845

Gene position: 768874-769914 (Clockwise)

Preceding gene: 41406844

Following gene: 41406846

Centisome position: 15.92

GC content: 69.55

Gene sequence:

>1041_bases
ATGTTATTCTCGCCGGGACGGTCACGACGAGAGGCGGCGCCGATGCTGTTGGAATTCGATGCTGATCAGCGGCTGTGGCA
GAGCACGGTGCGCGATGCCGTCACCAAGCAATGCCCGCCGTCGCTGGTGCGCAGCGTGGCCGAGGAGGGCGTCGACCCCA
GTCCGTTGTGGAAGTCCTACGTGGACCAGGGCTGGACCGAGCTCAACGACCCGGAGAGCACCGTCGAGCTGGCAATCGTT
CTCGAAGAGCTGGGCCACGCCACCGACCCCACACCCTTCCTGGCGACGATGAGCCAGTTCGCGCCGCTGGTGGGCGAGCA
CTTCGATCCGCACCAGTCCGGGACCGCCGTATACGGCGGGGTCTGCGCCTACCGGGACGCCGACGGTTGGGTGTTGGACG
GCACCGCGCGCCACGTGCTCGACGGCGACCGCGTCGACCGCCTCGCGGTGGTGACCGACGCCGGGGTGTTCATCACCGCG
GCCAATCAGGTGTCGGCAAGGCGCACGGCGGTGTTCGACCCGGTGCTGCACGTGGCCGACCTGTCGCTCGCCGAGGTGCG
GGTGCCCGACAGCGCCCGGCTGAGCGTCGATCCCGAGCGCGCACACCATGTGGCGCTGACCGGCATGGCGATCACCATGG
TCGGCGCCTGCCAGCGCATCCTCGATCTGGCGCTCGAGCACGTCAAAAGCCGTCAGCAGTTCGGCGTGCCGATCGGCTCG
TTCCAGGCCGTGCAGCACAAGGCCGCCGACATGCACGTCGCCGTGCAACGGGCCCGCGCGCTGGCCTATTTCGCCGCGCT
GACGATCGCGGCCGATGACCCCCGGCGCCGGCTGGCCGCCGCAATGGCCAAGGCGTCGGCGGGGGAGTGCCAGTCGCTGG
CCTTCCGGCACGGCCTGCAGCTGCACGGCGCCATGGGATTCACCTGGGAGAATGACCTGCAGTTCGCGCTCAAGCGGGCC
AAGGCGGGTGAGCTGATGCTCGGCGGCGCGGCGGAGCACCGGGCGCGGATCGCAGAGGAATACCGTGCAGCTGACTTTTG
A

Upstream 100 bases:

>100_bases
GGCCTGCTCAGCGGCCTCTAACGCACGGGAATTCCGGCCCGCCACCGCCGTCGCGTGAGTCCATGCCCGGATTCCGAGAT
TATTACTTCCGCAACGGAGA

Downstream 100 bases:

>100_bases
TCCCGACGTCGAGGCGTTCCGCGCCGAGTTCGCGGCGTTCCTGGACGAAAACCTGCCCCCGGCAAGCGAAACCCTGGACC
GTCCGCGATCGGTCTCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLFSPGRSRREAAPMLLEFDADQRLWQSTVRDAVTKQCPPSLVRSVAEEGVDPSPLWKSYVDQGWTELNDPESTVELAIV
LEELGHATDPTPFLATMSQFAPLVGEHFDPHQSGTAVYGGVCAYRDADGWVLDGTARHVLDGDRVDRLAVVTDAGVFITA
ANQVSARRTAVFDPVLHVADLSLAEVRVPDSARLSVDPERAHHVALTGMAITMVGACQRILDLALEHVKSRQQFGVPIGS
FQAVQHKAADMHVAVQRARALAYFAALTIAADDPRRRLAAAMAKASAGECQSLAFRHGLQLHGAMGFTWENDLQFALKRA
KAGELMLGGAAEHRARIAEEYRAADF

Sequences:

>Translated_346_residues
MLFSPGRSRREAAPMLLEFDADQRLWQSTVRDAVTKQCPPSLVRSVAEEGVDPSPLWKSYVDQGWTELNDPESTVELAIV
LEELGHATDPTPFLATMSQFAPLVGEHFDPHQSGTAVYGGVCAYRDADGWVLDGTARHVLDGDRVDRLAVVTDAGVFITA
ANQVSARRTAVFDPVLHVADLSLAEVRVPDSARLSVDPERAHHVALTGMAITMVGACQRILDLALEHVKSRQQFGVPIGS
FQAVQHKAADMHVAVQRARALAYFAALTIAADDPRRRLAAAMAKASAGECQSLAFRHGLQLHGAMGFTWENDLQFALKRA
KAGELMLGGAAEHRARIAEEYRAADF
>Mature_346_residues
MLFSPGRSRREAAPMLLEFDADQRLWQSTVRDAVTKQCPPSLVRSVAEEGVDPSPLWKSYVDQGWTELNDPESTVELAIV
LEELGHATDPTPFLATMSQFAPLVGEHFDPHQSGTAVYGGVCAYRDADGWVLDGTARHVLDGDRVDRLAVVTDAGVFITA
ANQVSARRTAVFDPVLHVADLSLAEVRVPDSARLSVDPERAHHVALTGMAITMVGACQRILDLALEHVKSRQQFGVPIGS
FQAVQHKAADMHVAVQRARALAYFAALTIAADDPRRRLAAAMAKASAGECQSLAFRHGLQLHGAMGFTWENDLQFALKRA
KAGELMLGGAAEHRARIAEEYRAADF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=252, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17533517, Length=172, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356377, Length=131, Percent_Identity=33.587786259542, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 37599; Mature: 37599

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSPGRSRREAAPMLLEFDADQRLWQSTVRDAVTKQCPPSLVRSVAEEGVDPSPLWKSY
CCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH
VDQGWTELNDPESTVELAIVLEELGHATDPTPFLATMSQFAPLVGEHFDPHQSGTAVYGG
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECC
VCAYRDADGWVLDGTARHVLDGDRVDRLAVVTDAGVFITAANQVSARRTAVFDPVLHVAD
EEEEECCCCEEECCCHHHHCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHC
LSLAEVRVPDSARLSVDPERAHHVALTGMAITMVGACQRILDLALEHVKSRQQFGVPIGS
CCHHEEECCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FQAVQHKAADMHVAVQRARALAYFAALTIAADDPRRRLAAAMAKASAGECQSLAFRHGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCE
LHGAMGFTWENDLQFALKRAKAGELMLGGAAEHRARIAEEYRAADF
EECCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLFSPGRSRREAAPMLLEFDADQRLWQSTVRDAVTKQCPPSLVRSVAEEGVDPSPLWKSY
CCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH
VDQGWTELNDPESTVELAIVLEELGHATDPTPFLATMSQFAPLVGEHFDPHQSGTAVYGG
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECC
VCAYRDADGWVLDGTARHVLDGDRVDRLAVVTDAGVFITAANQVSARRTAVFDPVLHVAD
EEEEECCCCEEECCCHHHHCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHC
LSLAEVRVPDSARLSVDPERAHHVALTGMAITMVGACQRILDLALEHVKSRQQFGVPIGS
CCHHEEECCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FQAVQHKAADMHVAVQRARALAYFAALTIAADDPRRRLAAAMAKASAGECQSLAFRHGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCE
LHGAMGFTWENDLQFALKRAKAGELMLGGAAEHRARIAEEYRAADF
EECCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]