| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997992
Identifier: 39997992
GI number: 39997992
Start: 3194535
End: 3195572
Strand: Reverse
Name: 39997992
Synonym: GSU2901
Alternate gene names: NA
Gene position: 3195572-3194535 (Counterclockwise)
Preceding gene: 39997993
Following gene: 39997990
Centisome position: 83.78
GC content: 70.04
Gene sequence:
>1038_bases ATGGTGGTGGCGGCGGGGCTTTTCCTCGGCGGCCTCGGTGCGCTTCTGGCGGTCTGGGGTAATCCGGAGAACTCGGGAAT CTGCGTTTCCTGCTTCATGGAGAACAGCGCCGGGGCCCTGGGGATGCACGACAACCCCCGCATGCAGTACCTGCGGCCTG AACTGATCGGCTTCGTGCTCGGCGCCGCGGCCAGCGCACTGCTCTTTCGCGAGTTCCGCTCCCGCGGCGGGGGCGCCCCC CTGCCGCGCCTCGTTGCGGGAGTGTTCCTCATTGTCGGCTGTGCCATCTTCATCGGCTGCCCCATCAAGCTCTTCCTGCG CCTGGCTGCCGGCGACCTGACCGCCGTTGCCGGCGTCGTGGGGCTGGTCGCCGGGGTCTGGGCCGGTCTCCGGGGGCTCG CCAACGGGGTGGAGCCGGGGCACCCGTCACCGGGCGTTGGTCACGGCGGCCCGCTGATCCCGGCCTTCTTTCTCCTGCTC CTGGTCTTTCTTCTCGTTCGCCCCGGTTTCATCATCTTTTCCGGCCAGGGGAGCGCGGCACAGCACGCTCCCGTTCCCCT TGCCCTGGGCGCCGGCGCGCTGCTCGGCGCCATGGCCCAGCGGAGCCGCTTCTGCATAACCGGCAGCATCCGTGATGCGT TCATCATGGGCAGACGGACCCCGGCCCTCTGGGGTGTGGTGGCCTTTCTGGCTGCGGCGGTGGCCGCCAACGTAGCCTTC GGCAGATTCAACCCCGGTCTCCACGGCCAGCCCGGCGCCCATCCGGAGCACCTCTGGAGCTTCCTCGGCATGGGGCTCGT GGGGTGGATTTCCGTCCTCATCGGCGGCTGCCCCTTCCGCCAGCTCATCAAGGCGGGCGAGGGGGACGCCGATGCGGGGC TCGTGGTGGTGGGGATGCTCATCGGCGGCGCCCTGGTCCAGTCGTGGGGCATTGCCGCCACGGCAGCCGGCGTTTCCCTT GCCGGCAAGGCCGCCCTTCTGGCGGGATTCGCCGCTGTTCTCGCCGCCTGCCTTTTCTGGCGGGCCCGTACCGCCTGA
Upstream 100 bases:
>100_bases CTGGCAACCGGAGCCTGGCGGCGTCCCTGCGCAAGGTCAACTACCTGAAGAGTCGGCTGGCGGGAGGGTGCGAGTAGTGC TGCGGGATCGGCATTTCTGG
Downstream 100 bases:
>100_bases CAGCCGATTATTTGAGTGTTTTTGTAGTGTTCTGAGGCGCATCCCTCCGGTGTTGTTCCTTTTTTTTCTCAAATGTAACA ATGACTGTCTGCGACTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MVVAAGLFLGGLGALLAVWGNPENSGICVSCFMENSAGALGMHDNPRMQYLRPELIGFVLGAAASALLFREFRSRGGGAP LPRLVAGVFLIVGCAIFIGCPIKLFLRLAAGDLTAVAGVVGLVAGVWAGLRGLANGVEPGHPSPGVGHGGPLIPAFFLLL LVFLLVRPGFIIFSGQGSAAQHAPVPLALGAGALLGAMAQRSRFCITGSIRDAFIMGRRTPALWGVVAFLAAAVAANVAF GRFNPGLHGQPGAHPEHLWSFLGMGLVGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMLIGGALVQSWGIAATAAGVSL AGKAALLAGFAAVLAACLFWRARTA
Sequences:
>Translated_345_residues MVVAAGLFLGGLGALLAVWGNPENSGICVSCFMENSAGALGMHDNPRMQYLRPELIGFVLGAAASALLFREFRSRGGGAP LPRLVAGVFLIVGCAIFIGCPIKLFLRLAAGDLTAVAGVVGLVAGVWAGLRGLANGVEPGHPSPGVGHGGPLIPAFFLLL LVFLLVRPGFIIFSGQGSAAQHAPVPLALGAGALLGAMAQRSRFCITGSIRDAFIMGRRTPALWGVVAFLAAAVAANVAF GRFNPGLHGQPGAHPEHLWSFLGMGLVGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMLIGGALVQSWGIAATAAGVSL AGKAALLAGFAAVLAACLFWRARTA >Mature_345_residues MVVAAGLFLGGLGALLAVWGNPENSGICVSCFMENSAGALGMHDNPRMQYLRPELIGFVLGAAASALLFREFRSRGGGAP LPRLVAGVFLIVGCAIFIGCPIKLFLRLAAGDLTAVAGVVGLVAGVWAGLRGLANGVEPGHPSPGVGHGGPLIPAFFLLL LVFLLVRPGFIIFSGQGSAAQHAPVPLALGAGALLGAMAQRSRFCITGSIRDAFIMGRRTPALWGVVAFLAAAVAANVAF GRFNPGLHGQPGAHPEHLWSFLGMGLVGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMLIGGALVQSWGIAATAAGVSL AGKAALLAGFAAVLAACLFWRARTA
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34971; Mature: 34971
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAAGLFLGGLGALLAVWGNPENSGICVSCFMENSAGALGMHDNPRMQYLRPELIGFVL CEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GAAASALLFREFRSRGGGAPLPRLVAGVFLIVGCAIFIGCPIKLFLRLAAGDLTAVAGVV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH GLVAGVWAGLRGLANGVEPGHPSPGVGHGGPLIPAFFLLLLVFLLVRPGFIIFSGQGSAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC QHAPVPLALGAGALLGAMAQRSRFCITGSIRDAFIMGRRTPALWGVVAFLAAAVAANVAF CCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GRFNPGLHGQPGAHPEHLWSFLGMGLVGWISVLIGGCPFRQLIKAGEGDADAGLVVVGML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH IGGALVQSWGIAATAAGVSLAGKAALLAGFAAVLAACLFWRARTA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVVAAGLFLGGLGALLAVWGNPENSGICVSCFMENSAGALGMHDNPRMQYLRPELIGFVL CEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GAAASALLFREFRSRGGGAPLPRLVAGVFLIVGCAIFIGCPIKLFLRLAAGDLTAVAGVV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH GLVAGVWAGLRGLANGVEPGHPSPGVGHGGPLIPAFFLLLLVFLLVRPGFIIFSGQGSAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC QHAPVPLALGAGALLGAMAQRSRFCITGSIRDAFIMGRRTPALWGVVAFLAAAVAANVAF CCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GRFNPGLHGQPGAHPEHLWSFLGMGLVGWISVLIGGCPFRQLIKAGEGDADAGLVVVGML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH IGGALVQSWGIAATAAGVSLAGKAALLAGFAAVLAACLFWRARTA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA