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The map label for this gene is asd [H]

Identifier: 39997969

GI number: 39997969

Start: 3153358

End: 3154461

Strand: Reverse

Name: asd [H]

Synonym: GSU2878

Alternate gene names: 39997969

Gene position: 3154461-3153358 (Counterclockwise)

Preceding gene: 39997970

Following gene: 39997968

Centisome position: 82.7

GC content: 63.59

Gene sequence:

>1104_bases
ATGAAAGTCGGAATCGTCGGTTGGCGCGGTATGGTCGGTTCGGTCCTCCTCCAGCGGATGGTGGAGGAAGGTGATTTTGG
CATCGGCATCGAGCCGGTCTTCTTCTCCACCTCCCAGGCGGGCCAGCCCGCCCCCATGAACGCGGGAACGCTCAAGAGCG
CCGATGACATCGCAGAGCTGAAGAAGCTCGACATCATCATCACCTGCCAGGGGGGCGACTACACCAAGGCGGTTCATCCT
GAACTCCGCAAGCAGGGATGGCAGGGTTACTGGATCGATGCGGCCTCAACCCTCCGGATGGAGCCCGATGCGGTCATCAT
CCTCGACCCGATCAACCGCAACGTCATCGACGCGGCCCTGGCCAAGGGGCAGAAGGACTTCATCGGCGGCAACTGCACCG
TCAGCCTCATGCTCATGGGACTGGGCGGTCTGTTCCGCGCCGGTCTGGTGGAGTGGATGTCGTCCATGACCTATCAGGCC
GCTTCCGGCGCCGGCGCTCCCAATATGCGCGAGCTCCTCTCCCAGATGGGTGTGCTACAGGGAGTAGTTGCCGAGGAGCT
GAAGAATCCGGGGTCGGCGATCCTGGAGATCGACAAGAAGGTGACCGCTACCCTGCGCGACGGGTCCATGCCGATGAAGG
AATTCGGCGGCTTCCCGTTGGCCGGCAACGTGCTCCCCTGGATCGACCGCGAGGTTGAGGACGGCCAGAGCCGCGAAGAG
TGGAAAGGGTTTGCCGAGACCAACAAGATCCTCGGTACCTCCACCCCGATCCCGGTCGATGGCATCTGCGTCCGCGTCGG
CGCCATGCGCTGCCACAGTCAGGCGATCACCATCAAGCTGAACAAGGACCTGCCGCTGGCCGACATCGAGCAGATCATCG
CCAACGACAATGCGTGGGCAAAGCTGGTCCCCAACACCAAGGCCGATACCCTTGCCCAGCTCACGCCGGCAGCGGTTTCC
GGGCTCCTCACGGTTCCCGTGGGCCGCGTGCGTAAGATGAAGATGGGGCCCCAGTTCGTGCAGGCCTTCACCTGCGGCGA
CCAGCTCCTCTGGGGTGCCGCAGAGCCCCTGCGCCGGATGCTCCGCATCCTGGTGGAAAAGTAG

Upstream 100 bases:

>100_bases
ACGGCGAGAAACTCGTCAACACCAAGGAGATGGGCGACGCGATCATCGCAGCCCTGTAACGGCTCAACCAAAATTCATTC
CCGAAAAAGGAGTTCTGCCT

Downstream 100 bases:

>100_bases
CGGCTCAGCCGCGAACGTACCGTCACGCAGTACCAGGACGCCCCGCCAGCGGGGCGTCTTCACGTTTCCATGCGGACCAT
CAAACTCATACTCGAATATG

Product: aspartate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: ASA dehydrogenase; ASADH [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKVGIVGWRGMVGSVLLQRMVEEGDFGIGIEPVFFSTSQAGQPAPMNAGTLKSADDIAELKKLDIIITCQGGDYTKAVHP
ELRKQGWQGYWIDAASTLRMEPDAVIILDPINRNVIDAALAKGQKDFIGGNCTVSLMLMGLGGLFRAGLVEWMSSMTYQA
ASGAGAPNMRELLSQMGVLQGVVAEELKNPGSAILEIDKKVTATLRDGSMPMKEFGGFPLAGNVLPWIDREVEDGQSREE
WKGFAETNKILGTSTPIPVDGICVRVGAMRCHSQAITIKLNKDLPLADIEQIIANDNAWAKLVPNTKADTLAQLTPAAVS
GLLTVPVGRVRKMKMGPQFVQAFTCGDQLLWGAAEPLRRMLRILVEK

Sequences:

>Translated_367_residues
MKVGIVGWRGMVGSVLLQRMVEEGDFGIGIEPVFFSTSQAGQPAPMNAGTLKSADDIAELKKLDIIITCQGGDYTKAVHP
ELRKQGWQGYWIDAASTLRMEPDAVIILDPINRNVIDAALAKGQKDFIGGNCTVSLMLMGLGGLFRAGLVEWMSSMTYQA
ASGAGAPNMRELLSQMGVLQGVVAEELKNPGSAILEIDKKVTATLRDGSMPMKEFGGFPLAGNVLPWIDREVEDGQSREE
WKGFAETNKILGTSTPIPVDGICVRVGAMRCHSQAITIKLNKDLPLADIEQIIANDNAWAKLVPNTKADTLAQLTPAAVS
GLLTVPVGRVRKMKMGPQFVQAFTCGDQLLWGAAEPLRRMLRILVEK
>Mature_367_residues
MKVGIVGWRGMVGSVLLQRMVEEGDFGIGIEPVFFSTSQAGQPAPMNAGTLKSADDIAELKKLDIIITCQGGDYTKAVHP
ELRKQGWQGYWIDAASTLRMEPDAVIILDPINRNVIDAALAKGQKDFIGGNCTVSLMLMGLGGLFRAGLVEWMSSMTYQA
ASGAGAPNMRELLSQMGVLQGVVAEELKNPGSAILEIDKKVTATLRDGSMPMKEFGGFPLAGNVLPWIDREVEDGQSREE
WKGFAETNKILGTSTPIPVDGICVRVGAMRCHSQAITIKLNKDLPLADIEQIIANDNAWAKLVPNTKADTLAQLTPAAVS
GLLTVPVGRVRKMKMGPQFVQAFTCGDQLLWGAAEPLRRMLRILVEK

Specific function: Second step in the common biosynthetic pathway leading from Asp to the cell wall precursor meso-diaminopimelate, to Lys, to Met, to Ile and to Thr. [C]

COG id: COG0136

COG function: function code E; Aspartate-semialdehyde dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789841, Length=366, Percent_Identity=65.0273224043716, Blast_Score=493, Evalue=1e-141,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000319
- InterPro:   IPR011534
- InterPro:   IPR012080
- InterPro:   IPR016040
- InterPro:   IPR000534
- InterPro:   IPR012280 [H]

Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]

EC number: =1.2.1.11 [H]

Molecular weight: Translated: 39619; Mature: 39619

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01103 ASD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGIVGWRGMVGSVLLQRMVEEGDFGIGIEPVFFSTSQAGQPAPMNAGTLKSADDIAEL
CCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH
KKLDIIITCQGGDYTKAVHPELRKQGWQGYWIDAASTLRMEPDAVIILDPINRNVIDAAL
HHCEEEEEECCCCCCCCCCHHHHHCCCCEEEEECCCEEEECCCEEEEECCCCCHHHHHHH
AKGQKDFIGGNCTVSLMLMGLGGLFRAGLVEWMSSMTYQAASGAGAPNMRELLSQMGVLQ
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEHHCCCCCCCHHHHHHHHHHHHH
GVVAEELKNPGSAILEIDKKVTATLRDGSMPMKEFGGFPLAGNVLPWIDREVEDGQSREE
HHHHHHHCCCCHHEEEECCHHEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCHHH
WKGFAETNKILGTSTPIPVDGICVRVGAMRCHSQAITIKLNKDLPLADIEQIIANDNAWA
HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEE
KLVPNTKADTLAQLTPAAVSGLLTVPVGRVRKMKMGPQFVQAFTCGDQLLWGAAEPLRRM
EECCCCCHHHHHHHCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHCCHHHHHHH
LRILVEK
HHHHHCC
>Mature Secondary Structure
MKVGIVGWRGMVGSVLLQRMVEEGDFGIGIEPVFFSTSQAGQPAPMNAGTLKSADDIAEL
CCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH
KKLDIIITCQGGDYTKAVHPELRKQGWQGYWIDAASTLRMEPDAVIILDPINRNVIDAAL
HHCEEEEEECCCCCCCCCCHHHHHCCCCEEEEECCCEEEECCCEEEEECCCCCHHHHHHH
AKGQKDFIGGNCTVSLMLMGLGGLFRAGLVEWMSSMTYQAASGAGAPNMRELLSQMGVLQ
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEHHCCCCCCCHHHHHHHHHHHHH
GVVAEELKNPGSAILEIDKKVTATLRDGSMPMKEFGGFPLAGNVLPWIDREVEDGQSREE
HHHHHHHCCCCHHEEEECCHHEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCHHH
WKGFAETNKILGTSTPIPVDGICVRVGAMRCHSQAITIKLNKDLPLADIEQIIANDNAWA
HCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEE
KLVPNTKADTLAQLTPAAVSGLLTVPVGRVRKMKMGPQFVQAFTCGDQLLWGAAEPLRRM
EECCCCCHHHHHHHCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHCCHHHHHHH
LRILVEK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9084174; 10984043 [H]