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The map label for this gene is ybhR [H]

Identifier: 39997918

GI number: 39997918

Start: 3110043

End: 3111173

Strand: Direct

Name: ybhR [H]

Synonym: GSU2826

Alternate gene names: 39997918

Gene position: 3110043-3111173 (Clockwise)

Preceding gene: 39997917

Following gene: 39997972

Centisome position: 81.54

GC content: 56.94

Gene sequence:

>1131_bases
ATGTTTGATCGCTTGAAAACCATGCTCATAAAAGAGGCAATCCAGATCCTGCGGGACCCGAAGATGCGGTTCATCATCCT
CGTTATCCCGGCGATCCAGATCACCCTCTTCGGCTACGCAGTCAACACCGATGTCAAGCACATCGCCACGGCGGTTTACG
ATCTGGACAACAGTGCCCTGAGCCGCGACCTCGTTGCCCGGCTGGAGCGCTCCGGCTACTTCGACATCGTCCAGCGGGTG
CAGCGGGGGGATGAACTGCGCGATCTGCTGGATCGGGGAAAAGTTCGGGCCGCGGTGCAGATAAATCGGGGATTCGAAGA
GAACATCCGCGCCGGGCGAACCGCAACGCTCCCGATTATTGTCGACGGCACTGACCCGAGCACCGCCAGGATCGTCGTGA
GCTATTCGGTAACCATTGCCGAACGGTTCAGCGATCAGATCCTGACCGACTATTCCCTGCGAAAGAGCGGCAGGACCACG
GGAGGCAACGGCATCGAACTGGAAAGCCGCGCGTGGTTCAACGCAAACCTGGAGAGCCGCAACTACTATGTTCCGGGGGT
CATCGCCTCAATGGTCCTGATCACCACAATGATGCTCTCCAGCATGGCCGTGGTGCGCGAAAAGGAAATCGGCACCATGG
AGCAGATCATCGTCACGCCAATCCAGCGATGGGAATTCATTGTCGGCAAATTGGTGCCGTTCGCTATCGTGGGCTACATC
AACGTCACCATCGTGACCTGCATTGCGCTCTTCTGGTTCAAAATCCCTCTCAGGGGCAGTATCCTATTGCTCATCGGCTC
AACCGCCCTGTTCCTGATGAGCACCCTCGGATTCGGGCTGCTCATATCAACCATCAGCCGGACACAGCAGCAGGCCATGA
TGAGTTCGTTCATGTTCACGTTCCCGGCCATGCTCCTGTCGGGCTTTGCGTTTCCCATCGAAAACATGCCCACGAGCATC
CAGTATGCCACCTATCTGAACCCGCTCCGCTACTACCTCGTCATTGTTCGAGGTATTTTCCTCAAAGGGATCGGTCTCGG
CATCTTGTGGCCTCAGCTAGCCGCATTGGCACTGCTGGGTTCGGTCGTGCTGCTCTTTGCGGTCGGTCGATTCAAAAAAT
CGGTGGGGTAA

Upstream 100 bases:

>100_bases
GGATCAGGGTGCTGGCCGGCGACATCCTCTTCCTGGCCGTGTTCGGGACGCTCATTTTCGCCCTGGCCGTACGGAAGTTC
CGCAAAAAAATGGGCTAGCC

Downstream 100 bases:

>100_bases
CCCGTCACTTCTCGAACGAAAAACGCCCCGGATTGCTCCGGGGCGCTCAGCTGAATGCCAAGACAATACTCACTGTCAGG
ACTTTTTCGATTTCCCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MFDRLKTMLIKEAIQILRDPKMRFIILVIPAIQITLFGYAVNTDVKHIATAVYDLDNSALSRDLVARLERSGYFDIVQRV
QRGDELRDLLDRGKVRAAVQINRGFEENIRAGRTATLPIIVDGTDPSTARIVVSYSVTIAERFSDQILTDYSLRKSGRTT
GGNGIELESRAWFNANLESRNYYVPGVIASMVLITTMMLSSMAVVREKEIGTMEQIIVTPIQRWEFIVGKLVPFAIVGYI
NVTIVTCIALFWFKIPLRGSILLLIGSTALFLMSTLGFGLLISTISRTQQQAMMSSFMFTFPAMLLSGFAFPIENMPTSI
QYATYLNPLRYYLVIVRGIFLKGIGLGILWPQLAALALLGSVVLLFAVGRFKKSVG

Sequences:

>Translated_376_residues
MFDRLKTMLIKEAIQILRDPKMRFIILVIPAIQITLFGYAVNTDVKHIATAVYDLDNSALSRDLVARLERSGYFDIVQRV
QRGDELRDLLDRGKVRAAVQINRGFEENIRAGRTATLPIIVDGTDPSTARIVVSYSVTIAERFSDQILTDYSLRKSGRTT
GGNGIELESRAWFNANLESRNYYVPGVIASMVLITTMMLSSMAVVREKEIGTMEQIIVTPIQRWEFIVGKLVPFAIVGYI
NVTIVTCIALFWFKIPLRGSILLLIGSTALFLMSTLGFGLLISTISRTQQQAMMSSFMFTFPAMLLSGFAFPIENMPTSI
QYATYLNPLRYYLVIVRGIFLKGIGLGILWPQLAALALLGSVVLLFAVGRFKKSVG
>Mature_376_residues
MFDRLKTMLIKEAIQILRDPKMRFIILVIPAIQITLFGYAVNTDVKHIATAVYDLDNSALSRDLVARLERSGYFDIVQRV
QRGDELRDLLDRGKVRAAVQINRGFEENIRAGRTATLPIIVDGTDPSTARIVVSYSVTIAERFSDQILTDYSLRKSGRTT
GGNGIELESRAWFNANLESRNYYVPGVIASMVLITTMMLSSMAVVREKEIGTMEQIIVTPIQRWEFIVGKLVPFAIVGYI
NVTIVTCIALFWFKIPLRGSILLLIGSTALFLMSTLGFGLLISTISRTQQQAMMSSFMFTFPAMLLSGFAFPIENMPTSI
QYATYLNPLRYYLVIVRGIFLKGIGLGILWPQLAALALLGSVVLLFAVGRFKKSVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=375, Percent_Identity=34.6666666666667, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1787011, Length=347, Percent_Identity=34.2939481268012, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI48994943, Length=374, Percent_Identity=29.4117647058824, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI226510979, Length=376, Percent_Identity=27.6595744680851, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24650855, Length=362, Percent_Identity=21.5469613259669, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24650853, Length=362, Percent_Identity=21.5469613259669, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI85725260, Length=379, Percent_Identity=21.6358839050132, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725262, Length=376, Percent_Identity=21.0106382978723, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41961; Mature: 41961

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLKTMLIKEAIQILRDPKMRFIILVIPAIQITLFGYAVNTDVKHIATAVYDLDNSAL
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHCCCHHH
SRDLVARLERSGYFDIVQRVQRGDELRDLLDRGKVRAAVQINRGFEENIRAGRTATLPII
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEEEEEE
VDGTDPSTARIVVSYSVTIAERFSDQILTDYSLRKSGRTTGGNGIELESRAWFNANLESR
EECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCC
NYYVPGVIASMVLITTMMLSSMAVVREKEIGTMEQIIVTPIQRWEFIVGKLVPFAIVGYI
CEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVTIVTCIALFWFKIPLRGSILLLIGSTALFLMSTLGFGLLISTISRTQQQAMMSSFMFT
HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPTSIQYATYLNPLRYYLVIVRGIFLKGIGLGILWPQLAALALLG
HHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SVVLLFAVGRFKKSVG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDRLKTMLIKEAIQILRDPKMRFIILVIPAIQITLFGYAVNTDVKHIATAVYDLDNSAL
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHCCCHHH
SRDLVARLERSGYFDIVQRVQRGDELRDLLDRGKVRAAVQINRGFEENIRAGRTATLPII
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEEEEEE
VDGTDPSTARIVVSYSVTIAERFSDQILTDYSLRKSGRTTGGNGIELESRAWFNANLESR
EECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCC
NYYVPGVIASMVLITTMMLSSMAVVREKEIGTMEQIIVTPIQRWEFIVGKLVPFAIVGYI
CEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVTIVTCIALFWFKIPLRGSILLLIGSTALFLMSTLGFGLLISTISRTQQQAMMSSFMFT
HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPTSIQYATYLNPLRYYLVIVRGIFLKGIGLGILWPQLAALALLG
HHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SVVLLFAVGRFKKSVG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]