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The map label for this gene is ybhS [H]

Identifier: 39997917

GI number: 39997917

Start: 3108907

End: 3110040

Strand: Direct

Name: ybhS [H]

Synonym: GSU2825

Alternate gene names: 39997917

Gene position: 3108907-3110040 (Clockwise)

Preceding gene: 39997916

Following gene: 39997918

Centisome position: 81.51

GC content: 64.46

Gene sequence:

>1134_bases
ATGAAGCTGCAGCGGATTACAGCGGTTGCCCGAAAGGAGTTCATTCACGTCTTCCGGGACATCCGGAGCCTCATCATGGG
AATCGCCATCCCGATGATGCTGCTCTTTCTCTTCGGCTACGCCCTGACCCTTGACGTGGACAACGTGCCCCTCGTGGTCT
GGGATCAGAGCGCCACGCCCGCCAGCCGCGACCTGGTGAGCCGGTTCAGCGGTTCGCGCTATTTCTCGCTCAGGGGATAC
GCCGGTGACTACCGGGAGATCGAACGGGCCATCGACCGGCGCGACGCCCTTATGGCGCTCGTCATCCCCCGCGGCTTTGC
CGGGGATCTCCAGGCGGGCCGCCAGGTCCGGGTCCAGGCCATTGTCGACGGAAGCGATTCCAATACGGCCACCACCGCCC
TGGGCTATGCCGAATTCATCGTCAGCACGTACAGCCGGTCCCTCATCATCGCCCAGATCCGGCGCTCGGCCGATCAGCCG
CCCCGCCCGCCGCTGGCCCCGGAACCGCGGGTCTGGTTCAATGCCGACCTGGTTTCCCGCAACGCCATCGTTCCCGGCCT
CATCGCCGTCATCATGATGGTCATCGCCGCGCTCCTCACCTCCCTCACCGTGGCGCGGGAGTGGGAAACCGGCACCATGG
AGCAGCTCATCTCCACGCCTCTCACCGGGGCGGAGCTAATCATAGGCAAACTCGTCCCCTACTTCTGCATCGGCCTCTTC
GACCTCGTGGTGGCGCTCCTGGCGGGGCGCTTCATCTTCCAGGTACCCACGCGGGGAGACCGGCCGCTGCTTCTGGCAAC
GTCCATCCTCTTCCTCCTGGTGGCCCTGGCCCTCGGCGTCTTCATCAGCATCGTCGGCAAAAGTCAGTTCGCGGCCAGCC
AATTCGCCATGGTGGCGACGCTGCTCCCCGCCTTCCTCCTGTCGGGCTTCGTCTTCCCCATCGCCAACATGCCCATCCCC
CTTCAGGCAATCACCCACGCCATCCCGGCCCGCTATTTCGTCACCATCCTGCGGGGGATCTATCTGAAGGGGATCGGGAT
CAGGGTGCTGGCCGGCGACATCCTCTTCCTGGCCGTGTTCGGGACGCTCATTTTCGCCCTGGCCGTACGGAAGTTCCGCA
AAAAAATGGGCTAG

Upstream 100 bases:

>100_bases
CCGACCGCATCGAAAAGATCATTCCTTCGCTGGAAGACGTTTTCGTATCCCTCATTGAAGCACGCGATCGGGAAGAAGGC
GCCCTGCGGGAGTTCAGCCG

Downstream 100 bases:

>100_bases
CCATGTTTGATCGCTTGAAAACCATGCTCATAAAAGAGGCAATCCAGATCCTGCGGGACCCGAAGATGCGGTTCATCATC
CTCGTTATCCCGGCGATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKLQRITAVARKEFIHVFRDIRSLIMGIAIPMMLLFLFGYALTLDVDNVPLVVWDQSATPASRDLVSRFSGSRYFSLRGY
AGDYREIERAIDRRDALMALVIPRGFAGDLQAGRQVRVQAIVDGSDSNTATTALGYAEFIVSTYSRSLIIAQIRRSADQP
PRPPLAPEPRVWFNADLVSRNAIVPGLIAVIMMVIAALLTSLTVAREWETGTMEQLISTPLTGAELIIGKLVPYFCIGLF
DLVVALLAGRFIFQVPTRGDRPLLLATSILFLLVALALGVFISIVGKSQFAASQFAMVATLLPAFLLSGFVFPIANMPIP
LQAITHAIPARYFVTILRGIYLKGIGIRVLAGDILFLAVFGTLIFALAVRKFRKKMG

Sequences:

>Translated_377_residues
MKLQRITAVARKEFIHVFRDIRSLIMGIAIPMMLLFLFGYALTLDVDNVPLVVWDQSATPASRDLVSRFSGSRYFSLRGY
AGDYREIERAIDRRDALMALVIPRGFAGDLQAGRQVRVQAIVDGSDSNTATTALGYAEFIVSTYSRSLIIAQIRRSADQP
PRPPLAPEPRVWFNADLVSRNAIVPGLIAVIMMVIAALLTSLTVAREWETGTMEQLISTPLTGAELIIGKLVPYFCIGLF
DLVVALLAGRFIFQVPTRGDRPLLLATSILFLLVALALGVFISIVGKSQFAASQFAMVATLLPAFLLSGFVFPIANMPIP
LQAITHAIPARYFVTILRGIYLKGIGIRVLAGDILFLAVFGTLIFALAVRKFRKKMG
>Mature_377_residues
MKLQRITAVARKEFIHVFRDIRSLIMGIAIPMMLLFLFGYALTLDVDNVPLVVWDQSATPASRDLVSRFSGSRYFSLRGY
AGDYREIERAIDRRDALMALVIPRGFAGDLQAGRQVRVQAIVDGSDSNTATTALGYAEFIVSTYSRSLIIAQIRRSADQP
PRPPLAPEPRVWFNADLVSRNAIVPGLIAVIMMVIAALLTSLTVAREWETGTMEQLISTPLTGAELIIGKLVPYFCIGLF
DLVVALLAGRFIFQVPTRGDRPLLLATSILFLLVALALGVFISIVGKSQFAASQFAMVATLLPAFLLSGFVFPIANMPIP
LQAITHAIPARYFVTILRGIYLKGIGIRVLAGDILFLAVFGTLIFALAVRKFRKKMG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=348, Percent_Identity=37.9310344827586, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1787010, Length=374, Percent_Identity=30.7486631016043, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI48994943, Length=379, Percent_Identity=30.0791556728232, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI226510979, Length=382, Percent_Identity=26.9633507853403, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI85725260, Length=378, Percent_Identity=21.957671957672, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI85725262, Length=378, Percent_Identity=21.6931216931217, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41363; Mature: 41363

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQRITAVARKEFIHVFRDIRSLIMGIAIPMMLLFLFGYALTLDVDNVPLVVWDQSATP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCC
ASRDLVSRFSGSRYFSLRGYAGDYREIERAIDRRDALMALVIPRGFAGDLQAGRQVRVQA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCEEEEEE
IVDGSDSNTATTALGYAEFIVSTYSRSLIIAQIRRSADQPPRPPLAPEPRVWFNADLVSR
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHCC
NAIVPGLIAVIMMVIAALLTSLTVAREWETGTMEQLISTPLTGAELIIGKLVPYFCIGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DLVVALLAGRFIFQVPTRGDRPLLLATSILFLLVALALGVFISIVGKSQFAASQFAMVAT
HHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPAFLLSGFVFPIANMPIPLQAITHAIPARYFVTILRGIYLKGIGIRVLAGDILFLAVF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GTLIFALAVRKFRKKMG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLQRITAVARKEFIHVFRDIRSLIMGIAIPMMLLFLFGYALTLDVDNVPLVVWDQSATP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCC
ASRDLVSRFSGSRYFSLRGYAGDYREIERAIDRRDALMALVIPRGFAGDLQAGRQVRVQA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCEEEEEE
IVDGSDSNTATTALGYAEFIVSTYSRSLIIAQIRRSADQPPRPPLAPEPRVWFNADLVSR
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHCC
NAIVPGLIAVIMMVIAALLTSLTVAREWETGTMEQLISTPLTGAELIIGKLVPYFCIGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DLVVALLAGRFIFQVPTRGDRPLLLATSILFLLVALALGVFISIVGKSQFAASQFAMVAT
HHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPAFLLSGFVFPIANMPIPLQAITHAIPARYFVTILRGIYLKGIGIRVLAGDILFLAVF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GTLIFALAVRKFRKKMG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]