Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is yeiH [C]
Identifier: 39997911
GI number: 39997911
Start: 3099680
End: 3100648
Strand: Direct
Name: yeiH [C]
Synonym: GSU2818
Alternate gene names: 39997911
Gene position: 3099680-3100648 (Clockwise)
Preceding gene: 39997908
Following gene: 39997916
Centisome position: 81.27
GC content: 58.62
Gene sequence:
>969_bases ATGATGCAACTAAATAGATGCAGAAAGGAGTGCGACATGAACGGCAGCAACCTGCGCAGGGGGACATTCACCATACTTCT GGCGTTGTGCGCAACCCCGTGGGTCGGCACGGCCCAGGCCCTGGTCATGGGAATAGCCCTCGGCCTTTTGCAGGCAAATC CGTGGCCACGGCAGACCGCCCGGTATAGCAAAATGCTCCTGCAGGCCTCGGTAGTCGGACTTGGCTTCGGGCTCAGCCTC GGCGAGGTGATACAAACCGGAAAGGATTCCATCTGGTACAGCGTAATCGGTATCTCGTGCACGCTCTTGGTGGGCTATGG CCTCGGCAAGCTGTTCAAGACGGGCACCAACACCTCGGCCCTTATTTCGTTCGGCACCGCCATTTGCGGCGGCAGCGCAA TCGCAGCCATGGCGCCGGTTCTGAAGGCGAAAAGTGACGAAACCGCCGTAGCGCTGGCAACGGTCTTTACCCTTAATTCC GCTGCGTTGCTGCTGTTTCCACTGGTAGGGCACTGGTTGCAGCTTGACCAGAATACCTTTGGCGTCTGGTCGGGACTGGC CATCCATGATACCAGCAGCGTTGTAGGCGCCACATCGGCATATGGCGCCACGGCATTGGCCATCGGGACGACAGTCAAAC TTACCAGAGCCATCTGGATAGCACCGGTCGTCATGGCGGCCTCCCTGATCAAGGGTGGCGAGCAGCAAGCCCGGATTCCG CTGTTTATCATCGGATTTCTCGGCGCGGCAGCCATCAGGACACTGTTGCCGTCCTATGAACATTTCTGGGGAGAACTGGC TGGCGTCGCCAAGCAATGCCTTGTCGTAACCTTGTTCTTGGTCGGAGCCGGGCTGAGCAGGGAGGTAGTGAAACAGGTCG GAATCAGGCCTCTGGTTCAGGCGGTTAGTCTGTGGGTTCTGGTGAGCGCGCTTACGCTCGTCGCTCTGAAATTGCCGTGG TCGGCATAA
Upstream 100 bases:
>100_bases TTTCCAGCTGCCTCAGACTAATCGCCATCGTCTTCCCTTATAAATAATACTGATCATAATAATTTTTATTACTCATTTTT TATTATATTCAAGGTGGTCT
Downstream 100 bases:
>100_bases GGGAGGAGCACACGCATACTGTGCCGACATCATACATTTCTGCAGGCTGCAAGTGGAATCCCTATCCGGCTCCCACTCAC AGCCTGCAGAGCTACAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MMQLNRCRKECDMNGSNLRRGTFTILLALCATPWVGTAQALVMGIALGLLQANPWPRQTARYSKMLLQASVVGLGFGLSL GEVIQTGKDSIWYSVIGISCTLLVGYGLGKLFKTGTNTSALISFGTAICGGSAIAAMAPVLKAKSDETAVALATVFTLNS AALLLFPLVGHWLQLDQNTFGVWSGLAIHDTSSVVGATSAYGATALAIGTTVKLTRAIWIAPVVMAASLIKGGEQQARIP LFIIGFLGAAAIRTLLPSYEHFWGELAGVAKQCLVVTLFLVGAGLSREVVKQVGIRPLVQAVSLWVLVSALTLVALKLPW SA
Sequences:
>Translated_322_residues MMQLNRCRKECDMNGSNLRRGTFTILLALCATPWVGTAQALVMGIALGLLQANPWPRQTARYSKMLLQASVVGLGFGLSL GEVIQTGKDSIWYSVIGISCTLLVGYGLGKLFKTGTNTSALISFGTAICGGSAIAAMAPVLKAKSDETAVALATVFTLNS AALLLFPLVGHWLQLDQNTFGVWSGLAIHDTSSVVGATSAYGATALAIGTTVKLTRAIWIAPVVMAASLIKGGEQQARIP LFIIGFLGAAAIRTLLPSYEHFWGELAGVAKQCLVVTLFLVGAGLSREVVKQVGIRPLVQAVSLWVLVSALTLVALKLPW SA >Mature_322_residues MMQLNRCRKECDMNGSNLRRGTFTILLALCATPWVGTAQALVMGIALGLLQANPWPRQTARYSKMLLQASVVGLGFGLSL GEVIQTGKDSIWYSVIGISCTLLVGYGLGKLFKTGTNTSALISFGTAICGGSAIAAMAPVLKAKSDETAVALATVFTLNS AALLLFPLVGHWLQLDQNTFGVWSGLAIHDTSSVVGATSAYGATALAIGTTVKLTRAIWIAPVVMAASLIKGGEQQARIP LFIIGFLGAAAIRTLLPSYEHFWGELAGVAKQCLVVTLFLVGAGLSREVVKQVGIRPLVQAVSLWVLVSALTLVALKLPW SA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=270, Percent_Identity=29.2592592592593, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2818_GEOSL (Q749C5)
Other databases:
- EMBL: AE017180 - RefSeq: NP_953862.1 - GeneID: 2686868 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU2818 - NMPDR: fig|243231.1.peg.2800 - TIGR: GSU2818 - HOGENOM: HBG669767 - OMA: WIIPVAL - ProtClustDB: CLSK2522256 - BioCyc: GSUL243231:GSU_2818-MONOMER - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 33844; Mature: 33844
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x10f2d550)-; HASH(0x11223b6c)-; HASH(0x10f2d508)-; HASH(0x11572154)-; HASH(0x1114b244)-; HASH(0x112d8350)-; HASH(0x10ee1fc4)-; HASH(0x10a41ee4)-; HASH(0x11572148)-;
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLNRCRKECDMNGSNLRRGTFTILLALCATPWVGTAQALVMGIALGLLQANPWPRQTA CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHH RYSKMLLQASVVGLGFGLSLGEVIQTGKDSIWYSVIGISCTLLVGYGLGKLFKTGTNTSA HHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LISFGTAICGGSAIAAMAPVLKAKSDETAVALATVFTLNSAALLLFPLVGHWLQLDQNTF HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC GVWSGLAIHDTSSVVGATSAYGATALAIGTTVKLTRAIWIAPVVMAASLIKGGEQQARIP HHHCCEEEECCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LFIIGFLGAAAIRTLLPSYEHFWGELAGVAKQCLVVTLFLVGAGLSREVVKQVGIRPLVQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHH AVSLWVLVSALTLVALKLPWSA HHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MMQLNRCRKECDMNGSNLRRGTFTILLALCATPWVGTAQALVMGIALGLLQANPWPRQTA CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHH RYSKMLLQASVVGLGFGLSLGEVIQTGKDSIWYSVIGISCTLLVGYGLGKLFKTGTNTSA HHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LISFGTAICGGSAIAAMAPVLKAKSDETAVALATVFTLNSAALLLFPLVGHWLQLDQNTF HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC GVWSGLAIHDTSSVVGATSAYGATALAIGTTVKLTRAIWIAPVVMAASLIKGGEQQARIP HHHCCEEEECCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LFIIGFLGAAAIRTLLPSYEHFWGELAGVAKQCLVVTLFLVGAGLSREVVKQVGIRPLVQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHH AVSLWVLVSALTLVALKLPWSA HHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA