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The map label for this gene is rbr [H]

Identifier: 39997907

GI number: 39997907

Start: 3092806

End: 3093378

Strand: Direct

Name: rbr [H]

Synonym: GSU2814

Alternate gene names: 39997907

Gene position: 3092806-3093378 (Clockwise)

Preceding gene: 39997906

Following gene: 39997908

Centisome position: 81.09

GC content: 61.61

Gene sequence:

>573_bases
ATGTCACTGAAAGGCACCAAAACCGAGCAGAACCTGCTGAAGTCATTTGCCGGCGAAAGCCAGGCACGCAACCGCTACAC
CTACTTTGCCGCCGCCGCCCGCAAGGAAGGGTACGTGCAGATCGCCGACATCTTCGAGGAAACCGCCAACCAGGAGAAGG
AGCACGCCAAGCGCTTTTTCAAGTTCCTGGAGGGGGGAGACCTGGAAATCACCGCCTGCTTCCCCTCTGGCAAGATCGGG
ACCACTGCCGAAAACCTGCTGGCCGCCGCCATGGGCGAGCATGAAGAGCATTCCGACCTCTACCCGGCGTTCGCCCAGGT
GGCCCAGGAAGAGGGATTTCCGGCAATCGCGGCGGTCTGGCGGGCCATTTCCGTGGCGGAAAAGCAGCACGAGAAGCGTT
ATCGTGACCTGCTCGCCAATATCGAGAACAACCGGGTCTTCACCCGCGAAGGTGAAGTAGTCTGGCGCTGCCGCAACTGC
GGCTACCTCCACACCGCCGCCGGAGCGCCGGAGCTGTGCCCTGCCTGCGCCCATCCCAAGGCACACTTCGAACTGCTCGG
AGAAAACTGGTAA

Upstream 100 bases:

>100_bases
GGGGCCTCATGAATGAAGCGGCCAGCGGCCCACGCTGGTGTTGCCGCATCGATTCTGGTATAGAACATATTCCAACCACT
GCTGGAAAGGAGAGCTGTAC

Downstream 100 bases:

>100_bases
AGCGCCGCCGGTGCAGCATCAAGGCGCGTCCCGGTGCGGGACGCGCCTTTTTATTTAAGGCACGGAACATGCAGTTTTCA
CCCCGGGATGACTGCCCGCG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSLKGTKTEQNLLKSFAGESQARNRYTYFAAAARKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPSGKIG
TTAENLLAAAMGEHEEHSDLYPAFAQVAQEEGFPAIAAVWRAISVAEKQHEKRYRDLLANIENNRVFTREGEVVWRCRNC
GYLHTAAGAPELCPACAHPKAHFELLGENW

Sequences:

>Translated_190_residues
MSLKGTKTEQNLLKSFAGESQARNRYTYFAAAARKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPSGKIG
TTAENLLAAAMGEHEEHSDLYPAFAQVAQEEGFPAIAAVWRAISVAEKQHEKRYRDLLANIENNRVFTREGEVVWRCRNC
GYLHTAAGAPELCPACAHPKAHFELLGENW
>Mature_189_residues
SLKGTKTEQNLLKSFAGESQARNRYTYFAAAARKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPSGKIGT
TAENLLAAAMGEHEEHSDLYPAFAQVAQEEGFPAIAAVWRAISVAEKQHEKRYRDLLANIENNRVFTREGEVVWRCRNCG
YLHTAAGAPELCPACAHPKAHFELLGENW

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 21283; Mature: 21152

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKGTKTEQNLLKSFAGESQARNRYTYFAAAARKEGYVQIADIFEETANQEKEHAKRFF
CCCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
KFLEGGDLEITACFPSGKIGTTAENLLAAAMGEHEEHSDLYPAFAQVAQEEGFPAIAAVW
HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RAISVAEKQHEKRYRDLLANIENNRVFTREGEVVWRCRNCGYLHTAAGAPELCPACAHPK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCH
AHFELLGENW
HHHHHCCCCC
>Mature Secondary Structure 
SLKGTKTEQNLLKSFAGESQARNRYTYFAAAARKEGYVQIADIFEETANQEKEHAKRFF
CCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
KFLEGGDLEITACFPSGKIGTTAENLLAAAMGEHEEHSDLYPAFAQVAQEEGFPAIAAVW
HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RAISVAEKQHEKRYRDLLANIENNRVFTREGEVVWRCRNCGYLHTAAGAPELCPACAHPK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCH
AHFELLGENW
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1932032; 1657933; 8383040; 1958203; 2835096; 8646540; 10201393; 10968622; 12175244; 12459910 [H]