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The map label for this gene is etfB [H]

Identifier: 39997890

GI number: 39997890

Start: 3076562

End: 3077380

Strand: Reverse

Name: etfB [H]

Synonym: GSU2797

Alternate gene names: 39997890

Gene position: 3077380-3076562 (Counterclockwise)

Preceding gene: 39997891

Following gene: 308513330

Centisome position: 80.68

GC content: 64.96

Gene sequence:

>819_bases
ATGCTCGCCATTTCCTGCATCAAACAAGTGCCGGATACCACCCAGGTCCAGATCGATCCGGTGACCAACACCCTCGTGCG
GGAGGGTATCCCGTTCATCGTCAACCCCTATGACACCCATGCCCTGGAAGAGGGGCTGCGGATCAAGGACCGCTACGGCT
TCAGGGCCGTGGCGCTTTCCATGGGGCCGCCCAATGCCGAAGCCGCCCTCAAGAAGGCGCTGGCCATGGGCGCCGATGAG
GCGATCCTCTGCTCCGACCGCTGTTTCGGCGGTGCCGACACCCTATCCACCAGTAACGTGCTGGCCGCCGCCATCAAGCG
GATCGCCGATGAGGCCGGCGACGAGATCGGCATCGTCTTCTGCGGCAAGCAAACCATTGACGGCGATACGGCCCAGGTGG
GGCCGGGCATTGCCGTTCGCCTCGGGTTCAGCCAGCTCACGCTGGTGGACCGGATCGAGCACCTGGACGCGGCGGCCCGC
ACGATCAGGGTGCGGCGCAAGCTGGAGGGACGCTACGAGGTGGTGGAGGCGCCGCTGCCGGTCATGATTACCGTGGTGCG
CGAGCTGAACCGCCCTCGCTATCCCACCGTTCCGCTGCGGCTTGCCTCCGTTGACGCCGCGGTCAAAGTCTGGAACAATG
AGGTCCTGCGCCTTGACGTGAACAGCGTCGGCCTCAAGGGGTCGCCCACCTGGGTGAGCCGGATCTTTTCGCCGGAGCGG
GCCAAGGGAGAGATCATCGGCGACGGCATGGTAGATCCGGTGGGCACGGCCAACCTGCTGATCAATCAACTGCTGGCAAA
GGATCTGCTGGCGGTGTGA

Upstream 100 bases:

>100_bases
TGATTAGCACTTTCTGTTTCTGTTATAGTGCCCGTCTGTTTAAAGTAAGGGCAGAACCCCTGCCTTCACGGCTGAGCCCT
TGACGGGCCGGAGGATATGA

Downstream 100 bases:

>100_bases
CGAATCAACGCCTGAACGCGTGAACGCATAGACGAGGTATTCAATGACTCAACCGGTAAAACCGAAGAAACCCCGGGGCC
GGGCACGGCTGATCGAAGGA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLAISCIKQVPDTTQVQIDPVTNTLVREGIPFIVNPYDTHALEEGLRIKDRYGFRAVALSMGPPNAEAALKKALAMGADE
AILCSDRCFGGADTLSTSNVLAAAIKRIADEAGDEIGIVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEHLDAAAR
TIRVRRKLEGRYEVVEAPLPVMITVVRELNRPRYPTVPLRLASVDAAVKVWNNEVLRLDVNSVGLKGSPTWVSRIFSPER
AKGEIIGDGMVDPVGTANLLINQLLAKDLLAV

Sequences:

>Translated_272_residues
MLAISCIKQVPDTTQVQIDPVTNTLVREGIPFIVNPYDTHALEEGLRIKDRYGFRAVALSMGPPNAEAALKKALAMGADE
AILCSDRCFGGADTLSTSNVLAAAIKRIADEAGDEIGIVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEHLDAAAR
TIRVRRKLEGRYEVVEAPLPVMITVVRELNRPRYPTVPLRLASVDAAVKVWNNEVLRLDVNSVGLKGSPTWVSRIFSPER
AKGEIIGDGMVDPVGTANLLINQLLAKDLLAV
>Mature_272_residues
MLAISCIKQVPDTTQVQIDPVTNTLVREGIPFIVNPYDTHALEEGLRIKDRYGFRAVALSMGPPNAEAALKKALAMGADE
AILCSDRCFGGADTLSTSNVLAAAIKRIADEAGDEIGIVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEHLDAAAR
TIRVRRKLEGRYEVVEAPLPVMITVVRELNRPRYPTVPLRLASVDAAVKVWNNEVLRLDVNSVGLKGSPTWVSRIFSPER
AKGEIIGDGMVDPVGTANLLINQLLAKDLLAV

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI62420877, Length=209, Percent_Identity=28.7081339712919, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503609, Length=218, Percent_Identity=28.4403669724771, Blast_Score=78, Evalue=7e-15,
Organism=Escherichia coli, GI87081682, Length=257, Percent_Identity=27.6264591439689, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=202, Percent_Identity=30.6930693069307, Blast_Score=98, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321646, Length=189, Percent_Identity=32.8042328042328, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24651147, Length=196, Percent_Identity=30.1020408163265, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24651145, Length=196, Percent_Identity=30.1020408163265, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29318; Mature: 29318

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAISCIKQVPDTTQVQIDPVTNTLVREGIPFIVNPYDTHALEEGLRIKDRYGFRAVALS
CCHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHCCCEEECCCCEEEEEEE
MGPPNAEAALKKALAMGADEAILCSDRCFGGADTLSTSNVLAAAIKRIADEAGDEIGIVF
CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
CGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEHLDAAARTIRVRRKLEGRYEVVEAPLP
ECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
VMITVVRELNRPRYPTVPLRLASVDAAVKVWNNEVLRLDVNSVGLKGSPTWVSRIFSPER
HHHHHHHHHCCCCCCCCCEEEEHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHCCCCC
AKGEIIGDGMVDPVGTANLLINQLLAKDLLAV
CCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAISCIKQVPDTTQVQIDPVTNTLVREGIPFIVNPYDTHALEEGLRIKDRYGFRAVALS
CCHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHCCCEEECCCCEEEEEEE
MGPPNAEAALKKALAMGADEAILCSDRCFGGADTLSTSNVLAAAIKRIADEAGDEIGIVF
CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
CGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEHLDAAARTIRVRRKLEGRYEVVEAPLP
ECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
VMITVVRELNRPRYPTVPLRLASVDAAVKVWNNEVLRLDVNSVGLKGSPTWVSRIFSPER
HHHHHHHHHCCCCCCCCCEEEEHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHCCCCC
AKGEIIGDGMVDPVGTANLLINQLLAKDLLAV
CCCCEECCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]