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The map label for this gene is fadF [H]

Identifier: 39997888

GI number: 39997888

Start: 3073134

End: 3075119

Strand: Reverse

Name: fadF [H]

Synonym: GSU2795

Alternate gene names: 39997888

Gene position: 3075119-3073134 (Counterclockwise)

Preceding gene: 308513330

Following gene: 39997886

Centisome position: 80.62

GC content: 64.6

Gene sequence:

>1986_bases
ATGTACATGCATCCGAATCCTGCCGTTTTTGCTCCACTGCTCCTGGCGTCCCTGGCATTCTTTGCCTGGAGCCTCTACCG
CAAGCTGAGCCTTGTTACCCTCGGCCGCCCCGGCTACACGTTCCGGGGGGTCGGCGAGGGACTCAGGGAGATGCTGCTGT
ACGCCTTCGTCCAGAAGCGGGTGCTCCATAAATTCTTCGGCCTGAACCACCTGGTCATCTTCTGGGCCTGCATGGTTCTG
GCCTTCGTGAACGTGGAATTCGTGGTGAGCGGCGTTTTCCCGGCGGCCCGCCTGTCGGCGCTGCCCGATGCCCTCTACGT
GCCGATCCGGTTCCTGTCGGACGTCATGTCGGCCCTCACGCTGGTGGCCATTGCCATCGCCCTGGTGCGGCGGACCTTCT
TCCCCCCTTATCCCGAGGCCCGCAGTTTCGAGTCGTACCTGATCCTCGTGCTCATCGCCGTCCACATGATCGCCTTTTTC
GGGGTGAGCGCCGCCGAGATCGCCCGGGGCGAGGAGCGGGCCGCAGCCTTCATGCCGATCGCCTCCTTCTTCGGCGAATT
CCTGGCCGATCTGACCCCCAAGCACATCGAGGCCACCTTCAATTTCTACTGGTGGCTCCATGCCGCCGCGCTCCTCTCCT
TCATAACGGTGCTGATCCCCTTCACCAAGCATCTGCACGTCTTTACGGCCATCGCCAACTGCTTCCTCCATCCGGAGGCA
CGGCCCAACACCCAGCTCCCCGAAGTCTTCGAGGCGGGGCGCGCCTTCGGTGTCGGCCAGGTGGACCGGTTCACGGTCAA
GGATCTCTTCGACCCCTTTGCCTGTACCAAGTGCGGTCGCTGTCAGCAGGTCTGCCCCGCCAACATCACCGGCAAGCCCC
TGAACCCGCGCCAGGTGGTGAATGACATCAAGGTGAACCTCCTGGCCAACGGGCCGCTCCTTAAGCGGGGCGGGGTGCCG
ACCCTGCCGCTCATCGGCGACGGCGGCCCGGGGAGCGTGTCCGAGGAGTCCATCTGGGCCTGCACCTCCTGCGGGGCCTG
CATGGAGGCCTGCCCGGTCTTTATCGAGCACCTGCCCAAGATCGTGGGAATGCGGCGTCACCTGGTCGAGATGGAGGCCC
GGTTCCCGGAAGAGCTTCTGAACCTTTTCGAGAACATGGAGCAGCGCTCCAACCCCTGGGGCATCGCCCCCGGTGAGCGG
ACCAAGTGGGCGTCCCTCCTGGATGTAAAACCCTTTGCCAAGGGCGAGACCGAGTATCTCCTCTACGTGGGGTGCGCCGG
CTCCTTCGACTCCCGCAGCAAGCAGGTGACGGTCAACCTGGCGACGATCCTCGACGCGGCCGGCATATCCTGGGGAATCC
TCGGCAAGGACGAGAAGTGCTGCGGCGACAGCCTCAGGCGCCTGGGGAACGAGTACGTCTTTGACCGGATGGCCCGGGAG
AATGTGGCTCTCTTCCGGGGGCGGGGGGTGACCAAGGTCATTGCCCAATGCCCCCACTGTTTCACCACCCTCAAGAACGA
CTACCGCCAGTACGGCATCGAGCTCGAGGTGATCCACCACGCGGAACTGATCCGGCAGCTCCTGGCCGAGGGCCGGCTGA
AGCTCGACCGCCGGGTGAGCGATCTGGGGAAGATCATTCTCCACGACTCCTGCTACCTCGGGCGGCACAACGACGTCTAT
GAAGCCCCGCGGGAGGTGGTGGCCACGGTCACCGGCACTGCACCGACCGAGTTCGACCGGGCCCGGGATGAGTCGTTCTG
CTGCGGCGCCGGCGGCGGTCGCATGTGGATGGAGGAGCAGACCGGCACCCGGATCAACCTGAACCGGGTCTCCGAAGCCC
TGTCGAAGAACCCCGACACCATCTGCGTTGCCTGCCCCTACTGCATGACCATGTTTGAGGACGGGCTCAAGGACAAGCAG
GCCGGCCAGACCCGGGTAAGAGACATTGCCGAGGTGGTGGCCGAGGGGATGCGGCCGGTTTCGTAG

Upstream 100 bases:

>100_bases
CGCATCCGGGAGCTGAAGAATCAGGGTCCTGTGACCGGCGGCTAGAGGTCACAGCCCGACCAGTTCGCACTTCATCATCT
CGCTCATTGCTACGAGGTTC

Downstream 100 bases:

>100_bases
CACAGCATTCGGCAGTGGTTGGCAATGAAAAAGGGCGCTCCCGGCGGAGCGCCCTTTTTCGTGCCATCAAGCCGTTGAAG
CGGTAATCGTGTCTCCGCCC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MYMHPNPAVFAPLLLASLAFFAWSLYRKLSLVTLGRPGYTFRGVGEGLREMLLYAFVQKRVLHKFFGLNHLVIFWACMVL
AFVNVEFVVSGVFPAARLSALPDALYVPIRFLSDVMSALTLVAIAIALVRRTFFPPYPEARSFESYLILVLIAVHMIAFF
GVSAAEIARGEERAAAFMPIASFFGEFLADLTPKHIEATFNFYWWLHAAALLSFITVLIPFTKHLHVFTAIANCFLHPEA
RPNTQLPEVFEAGRAFGVGQVDRFTVKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVVNDIKVNLLANGPLLKRGGVP
TLPLIGDGGPGSVSEESIWACTSCGACMEACPVFIEHLPKIVGMRRHLVEMEARFPEELLNLFENMEQRSNPWGIAPGER
TKWASLLDVKPFAKGETEYLLYVGCAGSFDSRSKQVTVNLATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARE
NVALFRGRGVTKVIAQCPHCFTTLKNDYRQYGIELEVIHHAELIRQLLAEGRLKLDRRVSDLGKIILHDSCYLGRHNDVY
EAPREVVATVTGTAPTEFDRARDESFCCGAGGGRMWMEEQTGTRINLNRVSEALSKNPDTICVACPYCMTMFEDGLKDKQ
AGQTRVRDIAEVVAEGMRPVS

Sequences:

>Translated_661_residues
MYMHPNPAVFAPLLLASLAFFAWSLYRKLSLVTLGRPGYTFRGVGEGLREMLLYAFVQKRVLHKFFGLNHLVIFWACMVL
AFVNVEFVVSGVFPAARLSALPDALYVPIRFLSDVMSALTLVAIAIALVRRTFFPPYPEARSFESYLILVLIAVHMIAFF
GVSAAEIARGEERAAAFMPIASFFGEFLADLTPKHIEATFNFYWWLHAAALLSFITVLIPFTKHLHVFTAIANCFLHPEA
RPNTQLPEVFEAGRAFGVGQVDRFTVKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVVNDIKVNLLANGPLLKRGGVP
TLPLIGDGGPGSVSEESIWACTSCGACMEACPVFIEHLPKIVGMRRHLVEMEARFPEELLNLFENMEQRSNPWGIAPGER
TKWASLLDVKPFAKGETEYLLYVGCAGSFDSRSKQVTVNLATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARE
NVALFRGRGVTKVIAQCPHCFTTLKNDYRQYGIELEVIHHAELIRQLLAEGRLKLDRRVSDLGKIILHDSCYLGRHNDVY
EAPREVVATVTGTAPTEFDRARDESFCCGAGGGRMWMEEQTGTRINLNRVSEALSKNPDTICVACPYCMTMFEDGLKDKQ
AGQTRVRDIAEVVAEGMRPVS
>Mature_661_residues
MYMHPNPAVFAPLLLASLAFFAWSLYRKLSLVTLGRPGYTFRGVGEGLREMLLYAFVQKRVLHKFFGLNHLVIFWACMVL
AFVNVEFVVSGVFPAARLSALPDALYVPIRFLSDVMSALTLVAIAIALVRRTFFPPYPEARSFESYLILVLIAVHMIAFF
GVSAAEIARGEERAAAFMPIASFFGEFLADLTPKHIEATFNFYWWLHAAALLSFITVLIPFTKHLHVFTAIANCFLHPEA
RPNTQLPEVFEAGRAFGVGQVDRFTVKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVVNDIKVNLLANGPLLKRGGVP
TLPLIGDGGPGSVSEESIWACTSCGACMEACPVFIEHLPKIVGMRRHLVEMEARFPEELLNLFENMEQRSNPWGIAPGER
TKWASLLDVKPFAKGETEYLLYVGCAGSFDSRSKQVTVNLATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARE
NVALFRGRGVTKVIAQCPHCFTTLKNDYRQYGIELEVIHHAELIRQLLAEGRLKLDRRVSDLGKIILHDSCYLGRHNDVY
EAPREVVATVTGTAPTEFDRARDESFCCGAGGGRMWMEEQTGTRINLNRVSEALSKNPDTICVACPYCMTMFEDGLKDKQ
AGQTRVRDIAEVVAEGMRPVS

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73529; Mature: 73529

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMHPNPAVFAPLLLASLAFFAWSLYRKLSLVTLGRPGYTFRGVGEGLREMLLYAFVQKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLHKFFGLNHLVIFWACMVLAFVNVEFVVSGVFPAARLSALPDALYVPIRFLSDVMSALT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVAIAIALVRRTFFPPYPEARSFESYLILVLIAVHMIAFFGVSAAEIARGEERAAAFMPI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
ASFFGEFLADLTPKHIEATFNFYWWLHAAALLSFITVLIPFTKHLHVFTAIANCFLHPEA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPNTQLPEVFEAGRAFGVGQVDRFTVKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVV
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHCCCCCCCCCCCCHHHHH
NDIKVNLLANGPLLKRGGVPTLPLIGDGGPGSVSEESIWACTSCGACMEACPVFIEHLPK
HHHHEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVGMRRHLVEMEARFPEELLNLFENMEQRSNPWGIAPGERTKWASLLDVKPFAKGETEYL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEE
LYVGCAGSFDSRSKQVTVNLATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARE
EEEECCCCCCCCCCEEEEEHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
NVALFRGRGVTKVIAQCPHCFTTLKNDYRQYGIELEVIHHAELIRQLLAEGRLKLDRRVS
HHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCHHHHHHHHH
DLGKIILHDSCYLGRHNDVYEAPREVVATVTGTAPTEFDRARDESFCCGAGGGRMWMEEQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEECCCCCCCEEECC
TGTRINLNRVSEALSKNPDTICVACPYCMTMFEDGLKDKQAGQTRVRDIAEVVAEGMRPV
CCCEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
S
C
>Mature Secondary Structure
MYMHPNPAVFAPLLLASLAFFAWSLYRKLSLVTLGRPGYTFRGVGEGLREMLLYAFVQKR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLHKFFGLNHLVIFWACMVLAFVNVEFVVSGVFPAARLSALPDALYVPIRFLSDVMSALT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVAIAIALVRRTFFPPYPEARSFESYLILVLIAVHMIAFFGVSAAEIARGEERAAAFMPI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
ASFFGEFLADLTPKHIEATFNFYWWLHAAALLSFITVLIPFTKHLHVFTAIANCFLHPEA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPNTQLPEVFEAGRAFGVGQVDRFTVKDLFDPFACTKCGRCQQVCPANITGKPLNPRQVV
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHCCCCCCCCCCCCHHHHH
NDIKVNLLANGPLLKRGGVPTLPLIGDGGPGSVSEESIWACTSCGACMEACPVFIEHLPK
HHHHEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVGMRRHLVEMEARFPEELLNLFENMEQRSNPWGIAPGERTKWASLLDVKPFAKGETEYL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEE
LYVGCAGSFDSRSKQVTVNLATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARE
EEEECCCCCCCCCCEEEEEHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
NVALFRGRGVTKVIAQCPHCFTTLKNDYRQYGIELEVIHHAELIRQLLAEGRLKLDRRVS
HHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCHHHHHHHHH
DLGKIILHDSCYLGRHNDVYEAPREVVATVTGTAPTEFDRARDESFCCGAGGGRMWMEEQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEECCCCCCCEEECC
TGTRINLNRVSEALSKNPDTICVACPYCMTMFEDGLKDKQAGQTRVRDIAEVVAEGMRPV
CCCEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]