Click here to switch to the map view.

The map label for this gene is 39997583

Identifier: 39997583

GI number: 39997583

Start: 2732754

End: 2733845

Strand: Direct

Name: 39997583

Synonym: GSU2488

Alternate gene names: NA

Gene position: 2732754-2733845 (Clockwise)

Preceding gene: 39997580

Following gene: 39997584

Centisome position: 71.65

GC content: 69.41

Gene sequence:

>1092_bases
ATGACACCTTTTCCCGCCTATGTTCCCCCCGACTTCACCCGGCCCGACCTGGCCGCCGCGCCGCCGGTCCGCGTGGCCGA
GGCCCCCGGCAGCGGCGTGCTCCCCGCCGGGTTTCACGCCACCTCAAACTATCCCGAATACGTCCACCTGGGGGGCGGTC
GCTGGCTCCTGGCCTCGGGAAGCAGAATGGACGCGGTGCTGGTGCTGGACGGCGACATGCTCAGGGTGGTGGAACCCCGC
CTGGTCCGGCGGGGAGACCGGGTGGTGGTGGGGCGGACCGAGAACGGCGAAGAAGGGATCTACGTGCACACCACGGGGTT
CGACGCCCCGGCCGGGGCGGGGGGAGACAAGTTCACCTTCCGCAGCCGCGGCACCCGGGAGAGCCCCTTTTCCCGCTCCT
ATGAAGAGTTGTACGACATCCTGCGCCACGACCGGGACCACGGCCACATCGTCTGGGTCCTCGGGCCCGCCGTGGCGTTC
GACCGGGACAGCCGCGCCGCCATGGCCGGCCTGATCGGCGGGGGCTACTGCCACGCGCTCCTGGCCGGCAACGCCCTGGC
CACCCACGATCTGGAGGCGGCCCTGTTCCACACCGGCCTCGGCCAGGACATCTACACCCAGGCCCTGGTGGCCGGCGGGC
ATTACCACCACCTGGACGTCATCAACGAAGTCCTGCGGCACGGCTCCCTGGAACGGGCCATCGCCGAGCTGGGGATTCGC
GACGGGATCATCCGCGCCTGCCTGGAGCACCGGGTGCCGGTGGTCCTGGCGGGCTCCATCCGGGACGACGGCCCGCTCCC
CGACGTGATCACCGATTCCCGCCAGGCCCAGGACGCCATGCGCGCCCACGCCCGACGGGCCACCACGGTCATCGCCCTGG
CCACCCAGCTGCACGCCATTGCCGTGGGCAACATGACCCCCAGCTACAGGGTGCTGGATGACGGCACCGTGCGGCCGGTA
TATTTCTATATCGTGGACATGTCCGAATTCGGGGCCGACAAGCTGGCCAACCGCGGGTCCGGCCAGGCCCGGGCCATCCT
CACCAACGTGCAGGATTTCATGGTCAATCTCTGGAACAATCTCAAGGGATGA

Upstream 100 bases:

>100_bases
CCACAGGGATCGGCCGGATGCAGGCCCGACCATTGACAACCGCGCCGGCAGGGGCTTTACTTTGCCTGACGCTACCGAGA
TTTTCCTGGGAGGTACGGCC

Downstream 100 bases:

>100_bases
CCCTCCCCTCGCGGGCTTGTCACGGCACGGCCGTTCGTGGTAGCCTTGTCGGCAGTGGCGGCTCTTCCGGCCGCCATCGG
CATTCACGGACCGGGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTPFPAYVPPDFTRPDLAAAPPVRVAEAPGSGVLPAGFHATSNYPEYVHLGGGRWLLASGSRMDAVLVLDGDMLRVVEPR
LVRRGDRVVVGRTENGEEGIYVHTTGFDAPAGAGGDKFTFRSRGTRESPFSRSYEELYDILRHDRDHGHIVWVLGPAVAF
DRDSRAAMAGLIGGGYCHALLAGNALATHDLEAALFHTGLGQDIYTQALVAGGHYHHLDVINEVLRHGSLERAIAELGIR
DGIIRACLEHRVPVVLAGSIRDDGPLPDVITDSRQAQDAMRAHARRATTVIALATQLHAIAVGNMTPSYRVLDDGTVRPV
YFYIVDMSEFGADKLANRGSGQARAILTNVQDFMVNLWNNLKG

Sequences:

>Translated_363_residues
MTPFPAYVPPDFTRPDLAAAPPVRVAEAPGSGVLPAGFHATSNYPEYVHLGGGRWLLASGSRMDAVLVLDGDMLRVVEPR
LVRRGDRVVVGRTENGEEGIYVHTTGFDAPAGAGGDKFTFRSRGTRESPFSRSYEELYDILRHDRDHGHIVWVLGPAVAF
DRDSRAAMAGLIGGGYCHALLAGNALATHDLEAALFHTGLGQDIYTQALVAGGHYHHLDVINEVLRHGSLERAIAELGIR
DGIIRACLEHRVPVVLAGSIRDDGPLPDVITDSRQAQDAMRAHARRATTVIALATQLHAIAVGNMTPSYRVLDDGTVRPV
YFYIVDMSEFGADKLANRGSGQARAILTNVQDFMVNLWNNLKG
>Mature_362_residues
TPFPAYVPPDFTRPDLAAAPPVRVAEAPGSGVLPAGFHATSNYPEYVHLGGGRWLLASGSRMDAVLVLDGDMLRVVEPRL
VRRGDRVVVGRTENGEEGIYVHTTGFDAPAGAGGDKFTFRSRGTRESPFSRSYEELYDILRHDRDHGHIVWVLGPAVAFD
RDSRAAMAGLIGGGYCHALLAGNALATHDLEAALFHTGLGQDIYTQALVAGGHYHHLDVINEVLRHGSLERAIAELGIRD
GIIRACLEHRVPVVLAGSIRDDGPLPDVITDSRQAQDAMRAHARRATTVIALATQLHAIAVGNMTPSYRVLDDGTVRPVY
FYIVDMSEFGADKLANRGSGQARAILTNVQDFMVNLWNNLKG

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 39299; Mature: 39168

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFPAYVPPDFTRPDLAAAPPVRVAEAPGSGVLPAGFHATSNYPEYVHLGGGRWLLASG
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECC
SRMDAVLVLDGDMLRVVEPRLVRRGDRVVVGRTENGEEGIYVHTTGFDAPAGAGGDKFTF
CCCCEEEEECCCCHHHCCHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEE
RSRGTRESPFSRSYEELYDILRHDRDHGHIVWVLGPAVAFDRDSRAAMAGLIGGGYCHAL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCHHHHHHHHCCHHHHHH
LAGNALATHDLEAALFHTGLGQDIYTQALVAGGHYHHLDVINEVLRHGSLERAIAELGIR
HHCCCHHHCCHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHHCHH
DGIIRACLEHRVPVVLAGSIRDDGPLPDVITDSRQAQDAMRAHARRATTVIALATQLHAI
HHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
AVGNMTPSYRVLDDGTVRPVYFYIVDMSEFGADKLANRGSGQARAILTNVQDFMVNLWNN
EECCCCCCEEEECCCCCCEEEEEEEEHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LKG
CCC
>Mature Secondary Structure 
TPFPAYVPPDFTRPDLAAAPPVRVAEAPGSGVLPAGFHATSNYPEYVHLGGGRWLLASG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECC
SRMDAVLVLDGDMLRVVEPRLVRRGDRVVVGRTENGEEGIYVHTTGFDAPAGAGGDKFTF
CCCCEEEEECCCCHHHCCHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEE
RSRGTRESPFSRSYEELYDILRHDRDHGHIVWVLGPAVAFDRDSRAAMAGLIGGGYCHAL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCHHHHHHHHCCHHHHHH
LAGNALATHDLEAALFHTGLGQDIYTQALVAGGHYHHLDVINEVLRHGSLERAIAELGIR
HHCCCHHHCCHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHHCHH
DGIIRACLEHRVPVVLAGSIRDDGPLPDVITDSRQAQDAMRAHARRATTVIALATQLHAI
HHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
AVGNMTPSYRVLDDGTVRPVYFYIVDMSEFGADKLANRGSGQARAILTNVQDFMVNLWNN
EECCCCCCEEEECCCCCCEEEEEEEEHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]