Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997298
Identifier: 39997298
GI number: 39997298
Start: 2414034
End: 2414345
Strand: Direct
Name: 39997298
Synonym: GSU2200
Alternate gene names: NA
Gene position: 2414034-2414345 (Clockwise)
Preceding gene: 39997297
Following gene: 39997299
Centisome position: 63.29
GC content: 53.85
Gene sequence:
>312_bases ATGAAAAAAGCAGTATCGATCGTTATGGCACTCGCACTCCTCACCATGAGCCTCGTTACCTTTAGCGGCACGGCCAGCGC CGCCGAAGTGAAGATGATCGCCACCATCAAAAAGATTGAGATGAAGGGCAGCGCGGCAACGGTTACCCTGAAGGACACCA AGAGCGACAAGACCGTAACCGTTACGGTCAAGGACGAGCTTACTCTCGACAAGTTCAAGGACAAGCGGATCGTTGAGGGC GACGAAATTCGCCTGAAGTATGACGATGCAACGGGTGAGTCCAAGCTCTTCAGAAAGACCGCCGGCTGCTGA
Upstream 100 bases:
>100_bases ACACCGGGAGGGAGGGCGCCAGCCCCCCTCCCCCAGCCCTACGGGGCACCATGCCACAGGCGGCCTGCTCCGCCAACAAC AGTACAAAGGAGACGGAACA
Downstream 100 bases:
>100_bases TGCTCCGGGGGCGCTGGAGCCCTCTGCGGAACCGTTGCAGCCCGGGCGCCTCGGCTGCAATTTTCTTCCGTTAATTAATC GTTTTATTTAGATATATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKKAVSIVMALALLTMSLVTFSGTASAAEVKMIATIKKIEMKGSAATVTLKDTKSDKTVTVTVKDELTLDKFKDKRIVEG DEIRLKYDDATGESKLFRKTAGC
Sequences:
>Translated_103_residues MKKAVSIVMALALLTMSLVTFSGTASAAEVKMIATIKKIEMKGSAATVTLKDTKSDKTVTVTVKDELTLDKFKDKRIVEG DEIRLKYDDATGESKLFRKTAGC >Mature_103_residues MKKAVSIVMALALLTMSLVTFSGTASAAEVKMIATIKKIEMKGSAATVTLKDTKSDKTVTVTVKDELTLDKFKDKRIVEG DEIRLKYDDATGESKLFRKTAGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11177; Mature: 11177
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAVSIVMALALLTMSLVTFSGTASAAEVKMIATIKKIEMKGSAATVTLKDTKSDKTVT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHEEEEEECCCEEEEEEECCCCCCEEE VTVKDELTLDKFKDKRIVEGDEIRLKYDDATGESKLFRKTAGC EEEECCCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCC >Mature Secondary Structure MKKAVSIVMALALLTMSLVTFSGTASAAEVKMIATIKKIEMKGSAATVTLKDTKSDKTVT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHEEEEEECCCEEEEEEECCCCCCEEE VTVKDELTLDKFKDKRIVEGDEIRLKYDDATGESKLFRKTAGC EEEECCCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA