Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39997275

Identifier: 39997275

GI number: 39997275

Start: 2387321

End: 2387878

Strand: Direct

Name: 39997275

Synonym: GSU2177

Alternate gene names: NA

Gene position: 2387321-2387878 (Clockwise)

Preceding gene: 39997274

Following gene: 39997276

Centisome position: 62.59

GC content: 48.57

Gene sequence:

>558_bases
ATGGATTTTGACAAGGCAGTTGCGTGGGTCGAAGAAAATAAGGCGATGATCAAGGGATATATCGCCAAGTACCGGAATTT
TTCACCGTATGAAGAACGTGATTACATGCAGGAAGCCTACGAATCTGCTTTCGTAGCCGCATGTCGCTGCGGTGAGAAGA
AGATCAAATTCGAGGCTGCCTTCTGGAAAGTATTTCGGAATCAGATCAGTGTCATAACGCCAGCGCCGGATATTCTGACC
CATGGATCGAATTCGATTCCCTCACATTTCTGTTCTGACGACCTTTCGGCTGTTGCTGAAAAACGCTCACAAGAAAGACA
GAAAGAGCCCGACATCGAGGCGATATTCCAGTCGGTGCGCCATCACCTCACGGAAAAGGAGCAACAGGTCCTTTATTGGG
CTCTCGGAATCGGTATGGAAGGACAGATGTCGAATTACGAGATTGCTGATCGGCTTGGATGCGTTGTTTCGAACGTCAGA
GATATCCTCAGCAGAGCACTCGACCGGATCAAATCCCTTGTCGAGAAAGGCAGCATCGATCCCAAGAATTTGGTCTGA

Upstream 100 bases:

>100_bases
ATTCATTCTGGCACGGCCTGGCTCACACAGATGAGCACAGGCAAAGCCGGTCATCGGAGCACGACTTCGAGGCCGGCTTT
TTTTTATTCGGAGCGAGACC

Downstream 100 bases:

>100_bases
TGTTGCAGCATATGCTTCATCACGAAAGGAGATGCACCATGAACCTGGAACAGGCAGCACAGCAGTATAAACCAGTACCA
CTGAAAGCCCTTAAACGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDFDKAVAWVEENKAMIKGYIAKYRNFSPYEERDYMQEAYESAFVAACRCGEKKIKFEAAFWKVFRNQISVITPAPDILT
HGSNSIPSHFCSDDLSAVAEKRSQERQKEPDIEAIFQSVRHHLTEKEQQVLYWALGIGMEGQMSNYEIADRLGCVVSNVR
DILSRALDRIKSLVEKGSIDPKNLV

Sequences:

>Translated_185_residues
MDFDKAVAWVEENKAMIKGYIAKYRNFSPYEERDYMQEAYESAFVAACRCGEKKIKFEAAFWKVFRNQISVITPAPDILT
HGSNSIPSHFCSDDLSAVAEKRSQERQKEPDIEAIFQSVRHHLTEKEQQVLYWALGIGMEGQMSNYEIADRLGCVVSNVR
DILSRALDRIKSLVEKGSIDPKNLV
>Mature_185_residues
MDFDKAVAWVEENKAMIKGYIAKYRNFSPYEERDYMQEAYESAFVAACRCGEKKIKFEAAFWKVFRNQISVITPAPDILT
HGSNSIPSHFCSDDLSAVAEKRSQERQKEPDIEAIFQSVRHHLTEKEQQVLYWALGIGMEGQMSNYEIADRLGCVVSNVR
DILSRALDRIKSLVEKGSIDPKNLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21172; Mature: 21172

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDKAVAWVEENKAMIKGYIAKYRNFSPYEERDYMQEAYESAFVAACRCGEKKIKFEAA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FWKVFRNQISVITPAPDILTHGSNSIPSHFCSDDLSAVAEKRSQERQKEPDIEAIFQSVR
HHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HHLTEKEQQVLYWALGIGMEGQMSNYEIADRLGCVVSNVRDILSRALDRIKSLVEKGSID
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKNLV
CCCCC
>Mature Secondary Structure
MDFDKAVAWVEENKAMIKGYIAKYRNFSPYEERDYMQEAYESAFVAACRCGEKKIKFEAA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FWKVFRNQISVITPAPDILTHGSNSIPSHFCSDDLSAVAEKRSQERQKEPDIEAIFQSVR
HHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HHLTEKEQQVLYWALGIGMEGQMSNYEIADRLGCVVSNVRDILSRALDRIKSLVEKGSID
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKNLV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA