Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997224
Identifier: 39997224
GI number: 39997224
Start: 2345865
End: 2346161
Strand: Direct
Name: 39997224
Synonym: GSU2126
Alternate gene names: NA
Gene position: 2345865-2346161 (Clockwise)
Preceding gene: 39997223
Following gene: 39997225
Centisome position: 61.5
GC content: 49.16
Gene sequence:
>297_bases ATGGCAGACAACAAACAGGAATCAAGCGGCAAAAAACCATCGGGAAAGCAGTCCTGGCAGGATCGTAAGCTGAAAAAGGT AGTCCGGGATGACATCGATGTCATCTCCCGGAAGACCTTGGATCAAAGCGACTTCATCACCATGCTCAACACCCACGACA ACGTACTTCACCGATTACGCATGACCATGGGCCGCAACAAGAACATCACGTTTGAAAAGGCGCAGGAGTTTATAGAGAGG AGCCAGAAGATTCGTGAAGAAATATGGCGGCCCCGGTTTTCTTGGACACGAAAATGA
Upstream 100 bases:
>100_bases TCGACGATACGGTATTTTCGGAATTATCGGATCGCTTCGGCAAAGGGATTGCCCTGCGGGCAACCGGCAGAATCTAACGT CAGAACACAGGGGAGGAATC
Downstream 100 bases:
>100_bases GGTAAATCTAGGTGTTCAAGGAGGTCGTCAATGGAAAAGGATGTCAGTGTCTCCGGTGCGGCGGAAGGAGAGCGTAGCTC GACTGGAGCAGCACCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MADNKQESSGKKPSGKQSWQDRKLKKVVRDDIDVISRKTLDQSDFITMLNTHDNVLHRLRMTMGRNKNITFEKAQEFIER SQKIREEIWRPRFSWTRK
Sequences:
>Translated_98_residues MADNKQESSGKKPSGKQSWQDRKLKKVVRDDIDVISRKTLDQSDFITMLNTHDNVLHRLRMTMGRNKNITFEKAQEFIER SQKIREEIWRPRFSWTRK >Mature_97_residues ADNKQESSGKKPSGKQSWQDRKLKKVVRDDIDVISRKTLDQSDFITMLNTHDNVLHRLRMTMGRNKNITFEKAQEFIERS QKIREEIWRPRFSWTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11821; Mature: 11689
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNKQESSGKKPSGKQSWQDRKLKKVVRDDIDVISRKTLDQSDFITMLNTHDNVLHRLR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MTMGRNKNITFEKAQEFIERSQKIREEIWRPRFSWTRK HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADNKQESSGKKPSGKQSWQDRKLKKVVRDDIDVISRKTLDQSDFITMLNTHDNVLHRLR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MTMGRNKNITFEKAQEFIERSQKIREEIWRPRFSWTRK HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA