Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997108

Identifier: 39997108

GI number: 39997108

Start: 2203228

End: 2203662

Strand: Direct

Name: 39997108

Synonym: GSU2010

Alternate gene names: NA

Gene position: 2203228-2203662 (Clockwise)

Preceding gene: 39997107

Following gene: 39997112

Centisome position: 57.76

GC content: 54.71

Gene sequence:

>435_bases
ATGACTAAAGTAGGAACCTGGATGACGAAGAATCCCGTCACCATCGAAAAGGACGCCACAGTCATTGAGGCGGTCCATCT
GATGAAGGAAAAGAGCATCCGCCGGTTGCCGGTAATGGACAAGGAAACGATCGTGGGAATCCTCACCGAGAAGATGGTGG
CCGATTTCAGACCGTCCAAGGCCACGTCGCTGGATACCTGGGAGGTCCACTACATTCTTTCCAAAACCTCGGTCACCGAG
GCCATGAATCCGAAACCCTACAAGGTAAAACCCGACACCGATCTGACCGAGGCGGCCCAACTTCTCCACGATCGCAAACT
CAATGGCGTCCTGGTGGTGGACGACAACGACCGGCTGGTCGGAATCCTCACCGTCACCAACGCTCTTGAGGCACTGATCG
AGATCTGCAAGGACCCGGATGCCTGCAAGAAATAA

Upstream 100 bases:

>100_bases
CAGGGTTGTCCTCTCCGGCACCGGTGAGGCTCTCCTGAACGACGAACATGTGAAGAAAGCATTCCTGGGAATGTAGAGGC
AACCATAGGAGGATACTGAC

Downstream 100 bases:

>100_bases
GTCGGCACCCTGGGCTCACGGCCCGGACTGGCCAGACAACTCACAAACCGCTTGAAAAGGAAAAAGGGGACACGTCAGTG
ACGGCCCCCTTTTTCCTTTT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: CBS Domain Containing Membrane Protein; CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; CBS Domain Protein/ACT Domain Protein; AcuB Family Protein; Acetoin Utilization Protein; Signal-Transduction Protein; Acetoin Utilization Protein AcuB; Acetoin Utilization Protein Acetoin Dehydrogenase; CBS Domain Pair-Containing Protein; CBS Domain Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; Acetoin Utilization AcuB Protein; Acetoin Dehydrogenase AcuB; Acetoin Utilization Protein Truncated; Cbs Domain Containing Membrane Protein; Acetoin Utilization /CBS Domain-Containing Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTE
AMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK

Sequences:

>Translated_144_residues
MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTE
AMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK
>Mature_143_residues
TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTEA
MNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16132; Mature: 16001

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSK
CCCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
ATSLDTWEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLV
CCCCCCEEEEEEEECCHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEE
GILTVTNALEALIEICKDPDACKK
EEEEHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSK
CCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
ATSLDTWEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLV
CCCCCCEEEEEEEECCHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEE
GILTVTNALEALIEICKDPDACKK
EEEEHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA