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The map label for this gene is pepF [H]

Identifier: 39996971

GI number: 39996971

Start: 2050853

End: 2052643

Strand: Direct

Name: pepF [H]

Synonym: GSU1873

Alternate gene names: 39996971

Gene position: 2050853-2052643 (Clockwise)

Preceding gene: 39996970

Following gene: 39996976

Centisome position: 53.77

GC content: 61.53

Gene sequence:

>1791_bases
ATGACAACAGATTTGAATTCCCTGCTCTGGGATACGTCGCCCCTCTACGCATCCGCAACCTGTGAAGACATAGACCGGGA
CCTGTCCCGCGGCGCTGCGGAGGCCCAGGCGTTTCGTGAACGCTACGCCGGAAAGGTGGCAACCCTTGATGCGGCTGAGG
TGGCAGATGCGGTGCGTCGCTACGAGGACCTCGGCGAGCTTCTGGCCAAACCCCAGCTGTACGCCCACCTCCTCTTTGCC
GCCGACTCGGAGGCCGACGATCACAAGCGGCTCTCCCAGCGGACTGCCGAGTTCGGCAATCTCATGAGCCGCGAGCTTCT
CTTCTTCGACCTGGAGATCATGGAAATAGCCGATGATCGCTTCGCCGGGCTGCTGTCCGACGAGCTCCTCGCCCCCTACC
GGCACTACCTGGAAAGCGTGCGGCGGTTTCGGCCCTACACCCTCAAGGAACGGGAGGAACAGCTCCTGAAAATGAAGAGC
CTCACGGGTACCGATGCCTTTTCACGGCTCTTCGACGAGTTATCGGCCTCTCTTCGCTATCGGATGGAACTTGAGGGTGA
AGAGCGGGACTTCACCGGCGAGGAACTCCTCGGACTCCTCCACCACCCTGAGGCCGGGGTGCGTGAACGCGCCTTTGCCA
CGTTCCTCAATCGCCACGAAGAAAACGGCATCGTTTTTTCGAGCGTGTTCAACAATGTTGCCCTGGATCACTCCCAGGAA
CTGGAGTTGAGGGGGTACCGCCACCCCATGGAACCGACGAACCTGGGCAATGATATCCCCGAAGAGGTGGTCAACCGGCT
GATGGACGTGTCCGAGGCCAACTATGGGCTGGCGCGGGACTACTTCCGCCTGAAGGCCCGGCTCCTGGGACTGCCGAAAC
TGAAGAACACCGACGTCTATGCCCCCGTTGGGGACAACGACCGGACGTACTCCTTTGACGAGGCAAGGGAACTGGTGCTT
GAAGCCTACGGCCGCTTTCACCCCCGTTTCGGGGAGATGGCCGCGGCGTTTTTCGACGAGCGGCGCATCGATGTCCTCCC
CCGCCCCGGCAAGAGTGGCGGAGCATTCTGCATGGGGATGACCCCGCACCTCTCCCCCTACCTGCTCCTGAACTACACCG
GCAACCTGCGCGACGTGGCCACCCTGGCCCACGAGCTGGGGCACGGCCTCCACTTCGAGCTGGCCCGGAAACAGACCATG
CTCAACTACCATGCCCCGCTGCCTCTGGCGGAAACGGCGTCGGTCTTCGGCGAGATGCTCCTGACTCGCTTCCTCCTCCA
GCGGGAGAGCGACCCGGCCATGAAAATATCGCTGCTGTGCGCCAAGATCGAGGACATCATCGCCACGACCTTCCGCCAGA
ACGTGCTCACCCGCTTCGAGGAGCGGATGCACCGGGAGCGGCAGGAGGGCCTCCTCACCTCATCACGGCTATGCGATCTC
TGGTGGGAGGAAAACGGCAGGCTTTACGGCGATGCCGTGGACATGATCCCCCCCTACCGCTGGGGCTGGAGCTATATTTC
TCACTTCATCCACGCGCGCTTCTACTGCTACTCTTACACCTTTGCGGAGTTGCTGGTTCTTTCCCTCTACCGCAACTACC
TGGAACAGGGAGAACGGTTCATCCCGACGTACCTGTCCATCCTGGAAAGCGGCGGCTCCCTCTCGCCCGCCGATACGGTC
AGGCCCGCCGGCATCGACCTGGCTGACCCGCATTTCTGGCAGAAGGGATACGATTTTCTTGCGGAACTGATCGAAGAACT
GAAGGGGCTGCTGGAACAGCGTCAGCATTGA

Upstream 100 bases:

>100_bases
CGTCAAGTTCATCCAAAAGCTCTATTGATTTCTCTTCTCCCTGTGATAACCAAAAATGGGAGCGCCTGATGCGCTCCCAT
TTTTTTGCGCGAGGATACCA

Downstream 100 bases:

>100_bases
CTAACAACAAAGGCCGCCGGGTGATAGCACTCCGGCGGCCTTGTCGCGTAACGTTGTGAGATCCTGTGTTACCGTATCCT
AGAACTGAAATCCCACCTCG

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MTTDLNSLLWDTSPLYASATCEDIDRDLSRGAAEAQAFRERYAGKVATLDAAEVADAVRRYEDLGELLAKPQLYAHLLFA
ADSEADDHKRLSQRTAEFGNLMSRELLFFDLEIMEIADDRFAGLLSDELLAPYRHYLESVRRFRPYTLKEREEQLLKMKS
LTGTDAFSRLFDELSASLRYRMELEGEERDFTGEELLGLLHHPEAGVRERAFATFLNRHEENGIVFSSVFNNVALDHSQE
LELRGYRHPMEPTNLGNDIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAPVGDNDRTYSFDEARELVL
EAYGRFHPRFGEMAAAFFDERRIDVLPRPGKSGGAFCMGMTPHLSPYLLLNYTGNLRDVATLAHELGHGLHFELARKQTM
LNYHAPLPLAETASVFGEMLLTRFLLQRESDPAMKISLLCAKIEDIIATTFRQNVLTRFEERMHRERQEGLLTSSRLCDL
WWEENGRLYGDAVDMIPPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRNYLEQGERFIPTYLSILESGGSLSPADTV
RPAGIDLADPHFWQKGYDFLAELIEELKGLLEQRQH

Sequences:

>Translated_596_residues
MTTDLNSLLWDTSPLYASATCEDIDRDLSRGAAEAQAFRERYAGKVATLDAAEVADAVRRYEDLGELLAKPQLYAHLLFA
ADSEADDHKRLSQRTAEFGNLMSRELLFFDLEIMEIADDRFAGLLSDELLAPYRHYLESVRRFRPYTLKEREEQLLKMKS
LTGTDAFSRLFDELSASLRYRMELEGEERDFTGEELLGLLHHPEAGVRERAFATFLNRHEENGIVFSSVFNNVALDHSQE
LELRGYRHPMEPTNLGNDIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAPVGDNDRTYSFDEARELVL
EAYGRFHPRFGEMAAAFFDERRIDVLPRPGKSGGAFCMGMTPHLSPYLLLNYTGNLRDVATLAHELGHGLHFELARKQTM
LNYHAPLPLAETASVFGEMLLTRFLLQRESDPAMKISLLCAKIEDIIATTFRQNVLTRFEERMHRERQEGLLTSSRLCDL
WWEENGRLYGDAVDMIPPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRNYLEQGERFIPTYLSILESGGSLSPADTV
RPAGIDLADPHFWQKGYDFLAELIEELKGLLEQRQH
>Mature_595_residues
TTDLNSLLWDTSPLYASATCEDIDRDLSRGAAEAQAFRERYAGKVATLDAAEVADAVRRYEDLGELLAKPQLYAHLLFAA
DSEADDHKRLSQRTAEFGNLMSRELLFFDLEIMEIADDRFAGLLSDELLAPYRHYLESVRRFRPYTLKEREEQLLKMKSL
TGTDAFSRLFDELSASLRYRMELEGEERDFTGEELLGLLHHPEAGVRERAFATFLNRHEENGIVFSSVFNNVALDHSQEL
ELRGYRHPMEPTNLGNDIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAPVGDNDRTYSFDEARELVLE
AYGRFHPRFGEMAAAFFDERRIDVLPRPGKSGGAFCMGMTPHLSPYLLLNYTGNLRDVATLAHELGHGLHFELARKQTML
NYHAPLPLAETASVFGEMLLTRFLLQRESDPAMKISLLCAKIEDIIATTFRQNVLTRFEERMHRERQEGLLTSSRLCDLW
WEENGRLYGDAVDMIPPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRNYLEQGERFIPTYLSILESGGSLSPADTVR
PAGIDLADPHFWQKGYDFLAELIEELKGLLEQRQH

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68572; Mature: 68441

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDLNSLLWDTSPLYASATCEDIDRDLSRGAAEAQAFRERYAGKVATLDAAEVADAVRR
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCHHHHHHHHHH
YEDLGELLAKPQLYAHLLFAADSEADDHKRLSQRTAEFGNLMSRELLFFDLEIMEIADDR
HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGLLSDELLAPYRHYLESVRRFRPYTLKEREEQLLKMKSLTGTDAFSRLFDELSASLRY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEE
RMELEGEERDFTGEELLGLLHHPEAGVRERAFATFLNRHEENGIVFSSVFNNVALDHSQE
EEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCC
LELRGYRHPMEPTNLGNDIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVY
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
APVGDNDRTYSFDEARELVLEAYGRFHPRFGEMAAAFFDERRIDVLPRPGKSGGAFCMGM
ECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
TPHLSPYLLLNYTGNLRDVATLAHELGHGLHFELARKQTMLNYHAPLPLAETASVFGEML
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LTRFLLQRESDPAMKISLLCAKIEDIIATTFRQNVLTRFEERMHRERQEGLLTSSRLCDL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WWEENGRLYGDAVDMIPPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRNYLEQGERF
HCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IPTYLSILESGGSLSPADTVRPAGIDLADPHFWQKGYDFLAELIEELKGLLEQRQH
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTDLNSLLWDTSPLYASATCEDIDRDLSRGAAEAQAFRERYAGKVATLDAAEVADAVRR
CCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCHHHHHHHHHH
YEDLGELLAKPQLYAHLLFAADSEADDHKRLSQRTAEFGNLMSRELLFFDLEIMEIADDR
HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGLLSDELLAPYRHYLESVRRFRPYTLKEREEQLLKMKSLTGTDAFSRLFDELSASLRY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEE
RMELEGEERDFTGEELLGLLHHPEAGVRERAFATFLNRHEENGIVFSSVFNNVALDHSQE
EEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCC
LELRGYRHPMEPTNLGNDIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVY
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEE
APVGDNDRTYSFDEARELVLEAYGRFHPRFGEMAAAFFDERRIDVLPRPGKSGGAFCMGM
ECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
TPHLSPYLLLNYTGNLRDVATLAHELGHGLHFELARKQTMLNYHAPLPLAETASVFGEML
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LTRFLLQRESDPAMKISLLCAKIEDIIATTFRQNVLTRFEERMHRERQEGLLTSSRLCDL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WWEENGRLYGDAVDMIPPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRNYLEQGERF
HCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IPTYLSILESGGSLSPADTVRPAGIDLADPHFWQKGYDFLAELIEELKGLLEQRQH
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]