Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is mucR [H]
Identifier: 39996961
GI number: 39996961
Start: 2039953
End: 2040456
Strand: Direct
Name: mucR [H]
Synonym: GSU1863
Alternate gene names: 39996961
Gene position: 2039953-2040456 (Clockwise)
Preceding gene: 39996947
Following gene: 39996969
Centisome position: 53.48
GC content: 57.14
Gene sequence:
>504_bases ATGGCGCCGACATTATTGGAATTGACCGCGAGTATTGTATCCTCACACGCTGCTGTGTCAGAGCTTTCCACGGAAGAACT GGTTCAGGAAATTCAAAAGGTTCATGCTACTCTGCAACAGCTTGAAGGTGGTGCTGCTGCACCCGAGGTTGCGGCAGAGG AAGCCAAGGCCCCGGCCATGACGCTCAAGAAAGCATTCCAGGCCGACCAGGTATGCTGCATGATCTGCGGCAAGGGTGGG ATGAAAACCCTTACCCGCCACTTGGCCCAAGTGCACCAGATGAAGCCGGGCGAATATCGCAAGCAGTTCAACATCCCCAG CAGCCAACCGCTTACCGCCAAAAAGTTCTCCGAGGCACGCAAGCAGATGGCCAAGGACCGGGGGCTTGCCGAAAATCTCG CCAAGGCGCGCGCCGTACGCGCCGCCAAGATTCAGGAGAAGAAGGCTGCGGCCGAAAAGCCGGCTAAAACCAAGGCTACT CGCGCCAAGAAAGCTACTGCCTGA
Upstream 100 bases:
>100_bases GGTATATTTCAACGATTTATCACTTGCTTTTGTCTGACAATACAGCTAAATATGTACTCAGGTTATTCATGTAATTCTCA CAAATCAAAGGAGGGAGTCA
Downstream 100 bases:
>100_bases TTACGATATCCTGCCCGTGGCACTAGGAAGCCGTTCGCCCAGCGAACGGCTTCTTTCTTTCCGCGCCCGCTATGATGCAC GGGGCTAAAGCGAGCCGCCG
Product: Ros/MucR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MAPTLLELTASIVSSHAAVSELSTEELVQEIQKVHATLQQLEGGAAAPEVAAEEAKAPAMTLKKAFQADQVCCMICGKGG MKTLTRHLAQVHQMKPGEYRKQFNIPSSQPLTAKKFSEARKQMAKDRGLAENLAKARAVRAAKIQEKKAAAEKPAKTKAT RAKKATA
Sequences:
>Translated_167_residues MAPTLLELTASIVSSHAAVSELSTEELVQEIQKVHATLQQLEGGAAAPEVAAEEAKAPAMTLKKAFQADQVCCMICGKGG MKTLTRHLAQVHQMKPGEYRKQFNIPSSQPLTAKKFSEARKQMAKDRGLAENLAKARAVRAAKIQEKKAAAEKPAKTKAT RAKKATA >Mature_166_residues APTLLELTASIVSSHAAVSELSTEELVQEIQKVHATLQQLEGGAAAPEVAAEEAKAPAMTLKKAFQADQVCCMICGKGGM KTLTRHLAQVHQMKPGEYRKQFNIPSSQPLTAKKFSEARKQMAKDRGLAENLAKARAVRAAKIQEKKAAAEKPAKTKATR AKKATA
Specific function: Could be involved in the regulation of exopolysaccharide synthesis [H]
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 17920; Mature: 17789
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTLLELTASIVSSHAAVSELSTEELVQEIQKVHATLQQLEGGAAAPEVAAEEAKAPAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHH TLKKAFQADQVCCMICGKGGMKTLTRHLAQVHQMKPGEYRKQFNIPSSQPLTAKKFSEAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHH KQMAKDRGLAENLAKARAVRAAKIQEKKAAAEKPAKTKATRAKKATA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure APTLLELTASIVSSHAAVSELSTEELVQEIQKVHATLQQLEGGAAAPEVAAEEAKAPAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHH TLKKAFQADQVCCMICGKGGMKTLTRHLAQVHQMKPGEYRKQFNIPSSQPLTAKKFSEAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHH KQMAKDRGLAENLAKARAVRAAKIQEKKAAAEKPAKTKATRAKKATA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]