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The map label for this gene is 39996511

Identifier: 39996511

GI number: 39996511

Start: 1548670

End: 1549026

Strand: Reverse

Name: 39996511

Synonym: GSU1410

Alternate gene names: NA

Gene position: 1549026-1548670 (Counterclockwise)

Preceding gene: 39996512

Following gene: 39996510

Centisome position: 40.61

GC content: 60.22

Gene sequence:

>357_bases
ATGTCGCCACGCAAGAAAAAACAACGCAACTGCATCTGCCCCCTCCGGGAGAAGCTGGGACACGTCTTCAAGCCCGCGGG
CACTCCGCTGAAGGAGATGGAGATCATCATCCTGGATCACGATGAGCTTGAGGCGCTGTTTCTCTGCGACAAGCTGGGGC
TGAACCAGGAGGAAGCGGGAACGCTGATGGGGGTTTCCCGGGGAACGGTCCAGCGGCTACTGGCCGAGGGAAGGAAAAAG
GTGATCGAAGCCCTTGTGGAGCAGAAAGCCCTGGCCGTGACCGGGGATGTGCCCGAACACGGCGTATCGGATGACAACGC
CGAGACCGGGGAACGGAAAGGAACCGAACATGGCTGA

Upstream 100 bases:

>100_bases
CCGCCTGGTACGTAAAATTTACCGGCACGCTCTTCGGTGAGGCACCAGCGCCGTCCTGTCCCGCACCGAGGCGGAACTGA
CCACCCGATGAAAGGAACCC

Downstream 100 bases:

>100_bases
GATTTATTCGGCGAAGGTATGGGATCACGTGCGCAACCCGCGCAATGTGGGGTCACTGGAGGATGCCAACGTGGTGGTAC
AGGCAGGCGACCCCACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSPRKKKQRNCICPLREKLGHVFKPAGTPLKEMEIIILDHDELEALFLCDKLGLNQEEAGTLMGVSRGTVQRLLAEGRKK
VIEALVEQKALAVTGDVPEHGVSDDNAETGERKGTEHG

Sequences:

>Translated_118_residues
MSPRKKKQRNCICPLREKLGHVFKPAGTPLKEMEIIILDHDELEALFLCDKLGLNQEEAGTLMGVSRGTVQRLLAEGRKK
VIEALVEQKALAVTGDVPEHGVSDDNAETGERKGTEHG
>Mature_117_residues
SPRKKKQRNCICPLREKLGHVFKPAGTPLKEMEIIILDHDELEALFLCDKLGLNQEEAGTLMGVSRGTVQRLLAEGRKKV
IEALVEQKALAVTGDVPEHGVSDDNAETGERKGTEHG

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002852 [H]

Pfam domain/function: PF02001 DUF134 [H]

EC number: NA

Molecular weight: Translated: 12970; Mature: 12839

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRKKKQRNCICPLREKLGHVFKPAGTPLKEMEIIILDHDELEALFLCDKLGLNQEEAG
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
TLMGVSRGTVQRLLAEGRKKVIEALVEQKALAVTGDVPEHGVSDDNAETGERKGTEHG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPRKKKQRNCICPLREKLGHVFKPAGTPLKEMEIIILDHDELEALFLCDKLGLNQEEAG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
TLMGVSRGTVQRLLAEGRKKVIEALVEQKALAVTGDVPEHGVSDDNAETGERKGTEHG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]