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The map label for this gene is 39996505

Identifier: 39996505

GI number: 39996505

Start: 1545736

End: 1546698

Strand: Reverse

Name: 39996505

Synonym: GSU1404

Alternate gene names: NA

Gene position: 1546698-1545736 (Counterclockwise)

Preceding gene: 39996507

Following gene: 39996501

Centisome position: 40.55

GC content: 60.96

Gene sequence:

>963_bases
ATGTTCATCTTCGGACCGGTACCATCCAGACGCCTGGGGCGCAGCCTCGGGCTCGACACCATACCTGCCAAGGCATGTTC
CTATTCTTGCGTTTACTGCCAGTTGGGCCGGACCTGCTCCATTCAGAGCGCCCGGCGCCGCTTCTGCCGCCCGGAAACCA
TTGCCGTCGAGGTTGAGCGGGCGGTCCGCAGACTCATCGAACGGGGCGAACGGATCGATTACCTTACGTTTGTGGCCGAC
GGTGAACCGACCCTTGACCTGAACCTCGGGAGAGAAATCGAGCTGCTCAGACCCCTCGGCATAAAAATCGCCGTCATCAC
CAACAGCTCGCTCATCTGGCGTTCCGACGTAAGGGCCGAACTTGCCCTGGCGGATTGGGTTTCCCTCAAGGTGGATGCAG
TGGACGGGGACGCATGGCACCGCATCAACAGGCCGGCCGCCACCCTGCGGCTCGCCGACCTCTTGAGCGGAATGGCCCTG
TTTGCCGAAGAGTTCACGGGGACACTCGCCACTGAGACCATGCTGGTGAGCGGCATCAATGACTCCGAAACCGAACTGGA
GATGCTTGCGGCGTTTCTGGGGGAGCTGAAACCGGACGTCTCCTATGTCGCAGTTCCTATCAGGCCGCCGACGGAGCGGT
GGGCGACGCCGCCGACAGCCGAGGCCCTCAATCGGGCCGTGCAGATTATTTCGGGAAGCGTTGAGCGAGTGGAATACCTC
ACCGGCTACGAAGGGAACGACTTTACCGGCAGTGGAGACGTGACCGCCGACCTGCTCGGCATCACGGGCGTTCATCCCTT
GCGGGAAGATGCCGCGCGTGAGCTTCTGGTCAAGGCAGGTACCGACTGGTCAGAGGTGGAACGGCTCATCGACAGGGGCC
TTCTTCTGGAAACCATCTATGACGGCCGAAAATTTCTGCTGCGCATGAGGCCATGCGCATTTCCCCTCAAAACGATGCAC
TAA

Upstream 100 bases:

>100_bases
TGGAATATATTTCCGAACAGGGTATACTTTGGGATGAATTCATGATCTTGCCGGGTGCATGCCCGGACGAACCGTAGTGC
TCAAGGAAGACGGACGCATC

Downstream 100 bases:

>100_bases
ATCCGGACACAAAATGATCCAACAAAAGCAGCCTTGAGCGATCAGGCTTTCCGACGGCGCTGTTCTCGTTTTTCGCGGCC
GGCCAGGGCTGCAACCTCCG

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MFIFGPVPSRRLGRSLGLDTIPAKACSYSCVYCQLGRTCSIQSARRRFCRPETIAVEVERAVRRLIERGERIDYLTFVAD
GEPTLDLNLGREIELLRPLGIKIAVITNSSLIWRSDVRAELALADWVSLKVDAVDGDAWHRINRPAATLRLADLLSGMAL
FAEEFTGTLATETMLVSGINDSETELEMLAAFLGELKPDVSYVAVPIRPPTERWATPPTAEALNRAVQIISGSVERVEYL
TGYEGNDFTGSGDVTADLLGITGVHPLREDAARELLVKAGTDWSEVERLIDRGLLLETIYDGRKFLLRMRPCAFPLKTMH

Sequences:

>Translated_320_residues
MFIFGPVPSRRLGRSLGLDTIPAKACSYSCVYCQLGRTCSIQSARRRFCRPETIAVEVERAVRRLIERGERIDYLTFVAD
GEPTLDLNLGREIELLRPLGIKIAVITNSSLIWRSDVRAELALADWVSLKVDAVDGDAWHRINRPAATLRLADLLSGMAL
FAEEFTGTLATETMLVSGINDSETELEMLAAFLGELKPDVSYVAVPIRPPTERWATPPTAEALNRAVQIISGSVERVEYL
TGYEGNDFTGSGDVTADLLGITGVHPLREDAARELLVKAGTDWSEVERLIDRGLLLETIYDGRKFLLRMRPCAFPLKTMH
>Mature_320_residues
MFIFGPVPSRRLGRSLGLDTIPAKACSYSCVYCQLGRTCSIQSARRRFCRPETIAVEVERAVRRLIERGERIDYLTFVAD
GEPTLDLNLGREIELLRPLGIKIAVITNSSLIWRSDVRAELALADWVSLKVDAVDGDAWHRINRPAATLRLADLLSGMAL
FAEEFTGTLATETMLVSGINDSETELEMLAAFLGELKPDVSYVAVPIRPPTERWATPPTAEALNRAVQIISGSVERVEYL
TGYEGNDFTGSGDVTADLLGITGVHPLREDAARELLVKAGTDWSEVERLIDRGLLLETIYDGRKFLLRMRPCAFPLKTMH

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35493; Mature: 35493

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIFGPVPSRRLGRSLGLDTIPAKACSYSCVYCQLGRTCSIQSARRRFCRPETIAVEVER
CEEECCCCHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEHHH
AVRRLIERGERIDYLTFVADGEPTLDLNLGREIELLRPLGIKIAVITNSSLIWRSDVRAE
HHHHHHHCCCCEEEEEEEECCCCEEEECCCCCEEEECCCCEEEEEEECCCEEEECCCHHH
LALADWVSLKVDAVDGDAWHRINRPAATLRLADLLSGMALFAEEFTGTLATETMLVSGIN
HHHHHEEEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEECCC
DSETELEMLAAFLGELKPDVSYVAVPIRPPTERWATPPTAEALNRAVQIISGSVERVEYL
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
TGYEGNDFTGSGDVTADLLGITGVHPLREDAARELLVKAGTDWSEVERLIDRGLLLETIY
CCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
DGRKFLLRMRPCAFPLKTMH
CCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFIFGPVPSRRLGRSLGLDTIPAKACSYSCVYCQLGRTCSIQSARRRFCRPETIAVEVER
CEEECCCCHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEHHH
AVRRLIERGERIDYLTFVADGEPTLDLNLGREIELLRPLGIKIAVITNSSLIWRSDVRAE
HHHHHHHCCCCEEEEEEEECCCCEEEECCCCCEEEECCCCEEEEEEECCCEEEECCCHHH
LALADWVSLKVDAVDGDAWHRINRPAATLRLADLLSGMALFAEEFTGTLATETMLVSGIN
HHHHHEEEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEECCC
DSETELEMLAAFLGELKPDVSYVAVPIRPPTERWATPPTAEALNRAVQIISGSVERVEYL
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
TGYEGNDFTGSGDVTADLLGITGVHPLREDAARELLVKAGTDWSEVERLIDRGLLLETIY
CCCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
DGRKFLLRMRPCAFPLKTMH
CCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]