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The map label for this gene is 39996499

Identifier: 39996499

GI number: 39996499

Start: 1535639

End: 1537342

Strand: Reverse

Name: 39996499

Synonym: GSU1397

Alternate gene names: NA

Gene position: 1537342-1535639 (Counterclockwise)

Preceding gene: 39996500

Following gene: 39996498

Centisome position: 40.31

GC content: 63.5

Gene sequence:

>1704_bases
ATGATCTGCGTGACCGGTAAACGTCTTGCTCTTTCCGCTGTTGCCATGCTGCTCATGCTGCTGTGCTCCGCCGCGACAGG
CCGCGCCGCAGCGCCGACCGCCGCGCTGTCTCCCGAAGAGATGCGCCAGGGCGAACGGATGTACCGGGAGGGGGTTCTCC
CCTCGGGTGCCCCCATGAAGGCGTTCGTGAGCGGAGACGTGCCGGTGGACGGCACGGCATTCACCTGCGTAAGCTGCCAC
CTGCACAGCGGCCTCGGCTCCTTCGAAGGAGAGGTGGTCACCCCCCCCACCAACGGCCGGGTGCTCTACCAGGAGCGCAA
GCCGTTCATTCCCGGTTCGGAATTCATCCCCTCCGTCTCCAACTACGCCAAGAACCTGCCGGTCAGGCCGGCCTACACCG
ACGAAACGCTGGCAAGCCTGATCGCCACGGGGATCGACCCCACCGGCCGCTCGGTACTCTACGTGATGCCCCGCTACGAA
CTCGGCGACCGGGACATGGCAATCCTCATCGCCTACCTGAAGGCGCTCTCCGACAAACCGTCACCGGGCGTCGGCACATC
TGAGATCAAGTTCGCCACGGTGATCGTGGAGGGAACCAACCCTCTTGCGGTAGAATCCATGCTGACCCCCATCCAGTTCA
GCGTAGACCGGAAAAACAGTCTCACCCTTGCGGCCAAGAAGAATTCCCGGGTGGCGCGCATGGCGTACAACATGCTCGGC
GACCTCCACAGTATGAGCTTCACCCTGTCCCGCTGGACCCTGAAAGGTCCGCCCGAAACCTGGCGGGCCCAGCTTGACCA
ATACTACCGCAACGAACCGGTCTTCGCCCTGCTTGGCGGAATCTCCGAGGGAGAGTGGGAACCGGTGCACCGGTTCTGCG
AGGAGAACCGCATCCCCAACCTTTTCCCCGTGGTCGATTACCCGGTCATCTCCGACACCGACTGGTACACACTCTATTTT
TCGCGCGGCGTCAGGCAGGAAGGGGAAGCCGCCGCCCGGTACCTCAACGGCATGGCGGGCCTCTTCGGCAACCGCCCCGT
GGTTCAGGTGATCAGGGATAGCCGCAAGGGCGAGGCCCTGGCCGATGGATTCCGCACCATCTGGCAGCAGCGTGGGCACG
CCGCCCCCCTCGACATCCGCCTGACCAAGGGGGAACGCCTCACGGACAAGCTGATCAGGGAGATCCTCGACACCCGCCGG
CCAGCGGCATTGCTGGTCTGGGACGACGATTCGGCCCTGCCCGCCCTGACCGGAGCCGCAGCCGGCAAGGAAGAACAACC
GACGGTCCTCCTGGCCTCCGGCACCTATCTGGGCAAAGCGCTCTGGAGCATTCCCGAGCCGCTGCGTGACCGCCTCTACC
TGACCTACCCCTACCGGCTGCCCCAGGAAGACGTCCGTTTCGACATTGCCGTGAAAAAAGTTCTGCCCGGCAAAGACATC
CAGTCCTTTGACCAGAAGATCATCCGGGAGTCGTTCATCACCGGCGAGGTCCTGGGCAAGGCACTGATGGAAATGCGGGC
GGAATACTACCGGGACTTCCTGCTGGACAGCATCGGCATGATGACCGACATGTACTACCCCCTCTACGAGCGGGTCAGCT
TCGGTCCGGGCCAGCGCTATGCATCCAAGGGGTGCTATATCGTGCAGCTCGGCAAAGGAGAATCGCCCAAGCTCGAACGG
CGCAGCGAATGGGTCATTCCGTGA

Upstream 100 bases:

>100_bases
TGACCTTCATCCGTTCGCCGGTCGACGGCAAATGGACAAGGATCTATGGCCTCATCAGCAACGTAGAATTGATGAATGAA
CTTACCAAAGCGGGGTTGAA

Downstream 100 bases:

>100_bases
CCCGAAGGGAGAATGCCATGTTGAAACAACTGCTTGCCCCCCTGCTCCTCCTGACTCTCGCGCTCCCTCCCTGCGTCCAC
TGCCAGGAACACGAAGGAGA

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C Family Protein

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MICVTGKRLALSAVAMLLMLLCSAATGRAAAPTAALSPEEMRQGERMYREGVLPSGAPMKAFVSGDVPVDGTAFTCVSCH
LHSGLGSFEGEVVTPPTNGRVLYQERKPFIPGSEFIPSVSNYAKNLPVRPAYTDETLASLIATGIDPTGRSVLYVMPRYE
LGDRDMAILIAYLKALSDKPSPGVGTSEIKFATVIVEGTNPLAVESMLTPIQFSVDRKNSLTLAAKKNSRVARMAYNMLG
DLHSMSFTLSRWTLKGPPETWRAQLDQYYRNEPVFALLGGISEGEWEPVHRFCEENRIPNLFPVVDYPVISDTDWYTLYF
SRGVRQEGEAAARYLNGMAGLFGNRPVVQVIRDSRKGEALADGFRTIWQQRGHAAPLDIRLTKGERLTDKLIREILDTRR
PAALLVWDDDSALPALTGAAAGKEEQPTVLLASGTYLGKALWSIPEPLRDRLYLTYPYRLPQEDVRFDIAVKKVLPGKDI
QSFDQKIIRESFITGEVLGKALMEMRAEYYRDFLLDSIGMMTDMYYPLYERVSFGPGQRYASKGCYIVQLGKGESPKLER
RSEWVIP

Sequences:

>Translated_567_residues
MICVTGKRLALSAVAMLLMLLCSAATGRAAAPTAALSPEEMRQGERMYREGVLPSGAPMKAFVSGDVPVDGTAFTCVSCH
LHSGLGSFEGEVVTPPTNGRVLYQERKPFIPGSEFIPSVSNYAKNLPVRPAYTDETLASLIATGIDPTGRSVLYVMPRYE
LGDRDMAILIAYLKALSDKPSPGVGTSEIKFATVIVEGTNPLAVESMLTPIQFSVDRKNSLTLAAKKNSRVARMAYNMLG
DLHSMSFTLSRWTLKGPPETWRAQLDQYYRNEPVFALLGGISEGEWEPVHRFCEENRIPNLFPVVDYPVISDTDWYTLYF
SRGVRQEGEAAARYLNGMAGLFGNRPVVQVIRDSRKGEALADGFRTIWQQRGHAAPLDIRLTKGERLTDKLIREILDTRR
PAALLVWDDDSALPALTGAAAGKEEQPTVLLASGTYLGKALWSIPEPLRDRLYLTYPYRLPQEDVRFDIAVKKVLPGKDI
QSFDQKIIRESFITGEVLGKALMEMRAEYYRDFLLDSIGMMTDMYYPLYERVSFGPGQRYASKGCYIVQLGKGESPKLER
RSEWVIP
>Mature_567_residues
MICVTGKRLALSAVAMLLMLLCSAATGRAAAPTAALSPEEMRQGERMYREGVLPSGAPMKAFVSGDVPVDGTAFTCVSCH
LHSGLGSFEGEVVTPPTNGRVLYQERKPFIPGSEFIPSVSNYAKNLPVRPAYTDETLASLIATGIDPTGRSVLYVMPRYE
LGDRDMAILIAYLKALSDKPSPGVGTSEIKFATVIVEGTNPLAVESMLTPIQFSVDRKNSLTLAAKKNSRVARMAYNMLG
DLHSMSFTLSRWTLKGPPETWRAQLDQYYRNEPVFALLGGISEGEWEPVHRFCEENRIPNLFPVVDYPVISDTDWYTLYF
SRGVRQEGEAAARYLNGMAGLFGNRPVVQVIRDSRKGEALADGFRTIWQQRGHAAPLDIRLTKGERLTDKLIREILDTRR
PAALLVWDDDSALPALTGAAAGKEEQPTVLLASGTYLGKALWSIPEPLRDRLYLTYPYRLPQEDVRFDIAVKKVLPGKDI
QSFDQKIIRESFITGEVLGKALMEMRAEYYRDFLLDSIGMMTDMYYPLYERVSFGPGQRYASKGCYIVQLGKGESPKLER
RSEWVIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63054; Mature: 63054

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICVTGKRLALSAVAMLLMLLCSAATGRAAAPTAALSPEEMRQGERMYREGVLPSGAPMK
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
AFVSGDVPVDGTAFTCVSCHLHSGLGSFEGEVVTPPTNGRVLYQERKPFIPGSEFIPSVS
EEEECCCCCCCCEEEEEEEHHHCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHCCCHH
NYAKNLPVRPAYTDETLASLIATGIDPTGRSVLYVMPRYELGDRDMAILIAYLKALSDKP
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
SPGVGTSEIKFATVIVEGTNPLAVESMLTPIQFSVDRKNSLTLAAKKNSRVARMAYNMLG
CCCCCCCCEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHH
DLHSMSFTLSRWTLKGPPETWRAQLDQYYRNEPVFALLGGISEGEWEPVHRFCEENRIPN
HHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
LFPVVDYPVISDTDWYTLYFSRGVRQEGEAAARYLNGMAGLFGNRPVVQVIRDSRKGEAL
EECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
ADGFRTIWQQRGHAAPLDIRLTKGERLTDKLIREILDTRRPAALLVWDDDSALPALTGAA
HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
AGKEEQPTVLLASGTYLGKALWSIPEPLRDRLYLTYPYRLPQEDVRFDIAVKKVLPGKDI
CCCCCCCEEEEECCCHHHHHHHHCCHHHHCCEEEEECCCCCHHHCEEEEEEEECCCCCCH
QSFDQKIIRESFITGEVLGKALMEMRAEYYRDFLLDSIGMMTDMYYPLYERVSFGPGQRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ASKGCYIVQLGKGESPKLERRSEWVIP
HCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MICVTGKRLALSAVAMLLMLLCSAATGRAAAPTAALSPEEMRQGERMYREGVLPSGAPMK
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
AFVSGDVPVDGTAFTCVSCHLHSGLGSFEGEVVTPPTNGRVLYQERKPFIPGSEFIPSVS
EEEECCCCCCCCEEEEEEEHHHCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHCCCHH
NYAKNLPVRPAYTDETLASLIATGIDPTGRSVLYVMPRYELGDRDMAILIAYLKALSDKP
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
SPGVGTSEIKFATVIVEGTNPLAVESMLTPIQFSVDRKNSLTLAAKKNSRVARMAYNMLG
CCCCCCCCEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHH
DLHSMSFTLSRWTLKGPPETWRAQLDQYYRNEPVFALLGGISEGEWEPVHRFCEENRIPN
HHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
LFPVVDYPVISDTDWYTLYFSRGVRQEGEAAARYLNGMAGLFGNRPVVQVIRDSRKGEAL
EECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
ADGFRTIWQQRGHAAPLDIRLTKGERLTDKLIREILDTRRPAALLVWDDDSALPALTGAA
HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
AGKEEQPTVLLASGTYLGKALWSIPEPLRDRLYLTYPYRLPQEDVRFDIAVKKVLPGKDI
CCCCCCCEEEEECCCHHHHHHHHCCHHHHCCEEEEECCCCCHHHCEEEEEEEECCCCCCH
QSFDQKIIRESFITGEVLGKALMEMRAEYYRDFLLDSIGMMTDMYYPLYERVSFGPGQRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ASKGCYIVQLGKGESPKLERRSEWVIP
HCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA