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The map label for this gene is cyd-1

Identifier: 39995472

GI number: 39995472

Start: 397076

End: 397351

Strand: Reverse

Name: cyd-1

Synonym: GSU0364

Alternate gene names: NA

Gene position: 397351-397076 (Counterclockwise)

Preceding gene: 39995473

Following gene: 39995471

Centisome position: 10.42

GC content: 60.51

Gene sequence:

>276_bases
ATGAAAAAACTGATCGCATCCCTGGCCCTCACCCTCTTCGCCGCCGGCGCCGCCCTGGCCGCCGACACCATGACCTTCAC
CGCCAAGAACGGTAACGTCACCTTTGACCACAAGAAACACCAGACGATCGTCCCCGACTGTGCCGTATGCCACGGCAAGA
CGCCGGGCAAGATCGAGGGATTCGGCAAGGAGATGGCGCACGGCAAGTCCTGCAAGGGGTGTCACGAGGAGATGAAAAAG
GGCCCCACCAAGTGCGGCGAGTGCCACAAGAAGTAA

Upstream 100 bases:

>100_bases
CATCGGGTGACACGGCGATAGATGTCGATGGCGGACAGGGCGCTGGCCTCCTACACTGGGACCATGCGATTTCGCACACA
CCCCCGAAAGGAGAATCACC

Downstream 100 bases:

>100_bases
TCCGACACCGGCATGAAGGAAGAGGGCGGAGCGATCCGCCCTTTTTCGTGCGAATCCCCTTGCCCCCGCCTCCCCCGCTC
CGGTATCCTCACGGCAATGA

Product: cytochrome C3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKKLIASLALTLFAAGAALAADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEGFGKEMAHGKSCKGCHEEMKK
GPTKCGECHKK

Sequences:

>Translated_91_residues
MKKLIASLALTLFAAGAALAADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEGFGKEMAHGKSCKGCHEEMKK
GPTKCGECHKK
>Mature_91_residues
MKKLIASLALTLFAAGAALAADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEGFGKEMAHGKSCKGCHEEMKK
GPTKCGECHKK

Specific function: May be involved in anaerobic iron respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002322
- InterPro:   IPR020942 [H]

Pfam domain/function: PF02085 Cytochrom_CIII [H]

EC number: NA

Molecular weight: Translated: 9672; Mature: 9672

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIASLALTLFAAGAALAADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEG
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
FGKEMAHGKSCKGCHEEMKKGPTKCGECHKK
CCHHHHCCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKLIASLALTLFAAGAALAADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEG
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
FGKEMAHGKSCKGCHEEMKKGPTKCGECHKK
CCHHHHCCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA