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The map label for this gene is xcpS [H]

Identifier: 39995436

GI number: 39995436

Start: 355703

End: 356914

Strand: Reverse

Name: xcpS [H]

Synonym: GSU0327

Alternate gene names: 39995436

Gene position: 356914-355703 (Counterclockwise)

Preceding gene: 308513280

Following gene: 39995435

Centisome position: 9.36

GC content: 64.11

Gene sequence:

>1212_bases
ATGCCGACCTTCCGGTATAGCGCCTATACGGCCGGGGGACGGGAGACGTCCGGCACCATCGAGGCTGAGAGCCTGAAGGA
GGCGAAGCTTCACCTGAAGCGGGACGGCCTCTATCCGCGTGACATTGGCCCAGTCTCCGAGACGGCGGGGACCGTCTCCC
GACGTTTCGGAGGGAGAAACGCAGGCCCCGCCCAGGTGGCTCTCATGACCCGCCGGCTTGCTACGTTGGTGGGCTCCCAG
GTGCCGATCTACGAGGCAGTGACCACGCTCTGGGAGCAGGAGGAGCCCGGCGAGATCAAAAAGGCCCTCGGCCGGATTCG
GGAACGCCTGGCCGAGGGAGCCAACCTGGCCAAGGCACTCTCCCTCGAACCGCGGCTTTTCAGCGAGAGCTACGTGGCAA
TGGTGGCGGCAGGCGAGGCAAGCGGCGCCCTGGACGCCGTTTTGGAGCGAGTCGCCCTCTTCCTCGAGGAACAGCGGGCC
ATTCGGAGCAAAATCACTGCCTCGTTGGCCTACCCGACGCTCATGGTCCTGGTGGGAAGCGCGGTAATGCTCTTCCTCCT
GGCCTTTGTCATTCCCAAGATCGTCACTATCTTTGAGGACAATCGGGCAGCCCTCCCCCTCATCACCATCGCCCTTATCA
AGACGAGCACCTTTCTCCGCTCGTTCTGGTGGGCATGCATCGCCGCCGTGGCCGGAGTGGTGCTGCTCTACCGGCGTCTC
ATGAAGGACGATGCCTTCCGCCTCCGCCGCGACCGCTTCCTTCTGCGGATTCCGGTGGTGGGAAGTCTCCTGCGCCAACT
CATCCTCTCCCGCTTCGCCAAGGTGCTGGGACTCCTCCTTTCCAGCGGTGTACCGGTCATGCGGGCTCTCGAAATCACGG
CCCAGGTTGTGGTCAACCGCCACTATCGTGCCGCCCTCACCGGCGTAACAGCCGGATTGGCCGAAGGCGGCACCCTTTCG
GGGGCTCTGCGTACCACGGGACTCTTTCCGCCTCTCCTGGTCCACATGGTCGCCGTTGGCGAGAAGGGGGGAGAGCTTGA
GGAGATGCTCGGCAAGGCCGGCAGCGCCTTCGAGCGGGAGTTCGAGTCGTCCGTATCCGGCCTCATGGCGCTTCTTGAGC
CGCTCCTCGTCCTGGCCATGGGGCTGGCCGTAGGGCTCGTGGTGGTCGCGGTACTGCTCCCCATCTTTGAACTTAATCAA
CTCATTCGCTGA

Upstream 100 bases:

>100_bases
GTCGGCAAGGGGATGCGGACCCTGCGCGACGACGGCCTGGCCAAGGCCGCAGCGGGCATCACAACCATCGAGGAGGTCCT
GCGGGTAACGCAGGAGGAGT

Downstream 100 bases:

>100_bases
TTTTTTCCAACCGGAGGTAACGGACCATGCATAACACCCTGCGCAACAGACGCGGCTTCACCCTCATCGAAATCATGGTG
GTCATCGCTATCCTGGCCCT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MPTFRYSAYTAGGRETSGTIEAESLKEAKLHLKRDGLYPRDIGPVSETAGTVSRRFGGRNAGPAQVALMTRRLATLVGSQ
VPIYEAVTTLWEQEEPGEIKKALGRIRERLAEGANLAKALSLEPRLFSESYVAMVAAGEASGALDAVLERVALFLEEQRA
IRSKITASLAYPTLMVLVGSAVMLFLLAFVIPKIVTIFEDNRAALPLITIALIKTSTFLRSFWWACIAAVAGVVLLYRRL
MKDDAFRLRRDRFLLRIPVVGSLLRQLILSRFAKVLGLLLSSGVPVMRALEITAQVVVNRHYRAALTGVTAGLAEGGTLS
GALRTTGLFPPLLVHMVAVGEKGGELEEMLGKAGSAFEREFESSVSGLMALLEPLLVLAMGLAVGLVVVAVLLPIFELNQ
LIR

Sequences:

>Translated_403_residues
MPTFRYSAYTAGGRETSGTIEAESLKEAKLHLKRDGLYPRDIGPVSETAGTVSRRFGGRNAGPAQVALMTRRLATLVGSQ
VPIYEAVTTLWEQEEPGEIKKALGRIRERLAEGANLAKALSLEPRLFSESYVAMVAAGEASGALDAVLERVALFLEEQRA
IRSKITASLAYPTLMVLVGSAVMLFLLAFVIPKIVTIFEDNRAALPLITIALIKTSTFLRSFWWACIAAVAGVVLLYRRL
MKDDAFRLRRDRFLLRIPVVGSLLRQLILSRFAKVLGLLLSSGVPVMRALEITAQVVVNRHYRAALTGVTAGLAEGGTLS
GALRTTGLFPPLLVHMVAVGEKGGELEEMLGKAGSAFEREFESSVSGLMALLEPLLVLAMGLAVGLVVVAVLLPIFELNQ
LIR
>Mature_402_residues
PTFRYSAYTAGGRETSGTIEAESLKEAKLHLKRDGLYPRDIGPVSETAGTVSRRFGGRNAGPAQVALMTRRLATLVGSQV
PIYEAVTTLWEQEEPGEIKKALGRIRERLAEGANLAKALSLEPRLFSESYVAMVAAGEASGALDAVLERVALFLEEQRAI
RSKITASLAYPTLMVLVGSAVMLFLLAFVIPKIVTIFEDNRAALPLITIALIKTSTFLRSFWWACIAAVAGVVLLYRRLM
KDDAFRLRRDRFLLRIPVVGSLLRQLILSRFAKVLGLLLSSGVPVMRALEITAQVVVNRHYRAALTGVTAGLAEGGTLSG
ALRTTGLFPPLLVHMVAVGEKGGELEEMLGKAGSAFEREFESSVSGLMALLEPLLVLAMGLAVGLVVVAVLLPIFELNQL
IR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=401, Percent_Identity=31.9201995012469, Blast_Score=212, Evalue=4e-56,
Organism=Escherichia coli, GI1786295, Length=395, Percent_Identity=26.3291139240506, Blast_Score=128, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43584; Mature: 43453

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFRYSAYTAGGRETSGTIEAESLKEAKLHLKRDGLYPRDIGPVSETAGTVSRRFGGRN
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
AGPAQVALMTRRLATLVGSQVPIYEAVTTLWEQEEPGEIKKALGRIRERLAEGANLAKAL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
SLEPRLFSESYVAMVAAGEASGALDAVLERVALFLEEQRAIRSKITASLAYPTLMVLVGS
CCCCHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVMLFLLAFVIPKIVTIFEDNRAALPLITIALIKTSTFLRSFWWACIAAVAGVVLLYRRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKDDAFRLRRDRFLLRIPVVGSLLRQLILSRFAKVLGLLLSSGVPVMRALEITAQVVVNR
HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HYRAALTGVTAGLAEGGTLSGALRTTGLFPPLLVHMVAVGEKGGELEEMLGKAGSAFERE
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHH
FESSVSGLMALLEPLLVLAMGLAVGLVVVAVLLPIFELNQLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTFRYSAYTAGGRETSGTIEAESLKEAKLHLKRDGLYPRDIGPVSETAGTVSRRFGGRN
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
AGPAQVALMTRRLATLVGSQVPIYEAVTTLWEQEEPGEIKKALGRIRERLAEGANLAKAL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
SLEPRLFSESYVAMVAAGEASGALDAVLERVALFLEEQRAIRSKITASLAYPTLMVLVGS
CCCCHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVMLFLLAFVIPKIVTIFEDNRAALPLITIALIKTSTFLRSFWWACIAAVAGVVLLYRRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKDDAFRLRRDRFLLRIPVVGSLLRQLILSRFAKVLGLLLSSGVPVMRALEITAQVVVNR
HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HYRAALTGVTAGLAEGGTLSGALRTTGLFPPLLVHMVAVGEKGGELEEMLGKAGSAFERE
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHH
FESSVSGLMALLEPLLVLAMGLAVGLVVVAVLLPIFELNQLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]