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The map label for this gene is 39995303

Identifier: 39995303

GI number: 39995303

Start: 204852

End: 205991

Strand: Reverse

Name: 39995303

Synonym: GSU0193

Alternate gene names: NA

Gene position: 205991-204852 (Counterclockwise)

Preceding gene: 39995306

Following gene: 39995301

Centisome position: 5.4

GC content: 66.4

Gene sequence:

>1140_bases
ATGCACCCGATCAAAACCCTTCGATTCCTGCTTGCCCACCTGTTCCTGCTGGCTGCTGCCACGGGCTGCAACGCCGCCCG
GACGCTGCCGGCCGCCATCACGCTCCCCCCCGGATTCAGCATCGCCGTTTATGCCGACAACGTGCCGGGGGCCCGCTCCA
TGGCCCTCGGCGCCAAGGGGACCCTGTTCGTGGGGAGCCGTGGGGAGGGCAAGGTCTACGCCCTGGCGGACCGCAACAGC
GACCAGGTGGCCGACGAGGTAATCACCATCGCCAAGGGGCTGCAGATGCCCAACGGTGTGGCCTTCCGAAACGGCTCCCT
CTACGTTGCAGAGGTGAGCCGGGTGCTGCGGTACGACGCCATCGAAGAGCGCCTGAAAAATCCCCCGCCGCCGGTCGTCG
TCAACGACTCCTTCCCGGACAGGACCCACCACGGCTGGAAATTCATCCGTTTCGGCCCCGACGGCAGGCTCTACGTGCCG
GTGGGGGCCCCGTGCAACGTCTGCGAGGAAAAGGACCCCCGTTTCGCCACCATCATGCGAATGAATCCGGACGGCACCGG
CCTGGAGATCTTCGCCAACGGAGTCCGCAACACGGTGGGCTTTGACTGGCACCCCCGCACCGGCGAACTCTGGTTCACGG
ACAACGGCCGCGACTGGCTGGGGAACGACCTGCCGCCGGACGAGCTCAACCGGGCGCCCCGGTCCGGTCTCCACTTCGGT
TTTCCCTATCGGCACGGCCGCGACATCCCCGACCCCGAATTCGACGCAAAGCGCAAGCCCGACCAACTCGTGGCGCCGGA
GATGGAGCTTGGCCCCCACGTGGCAGCCCTGGGCATGCGCTTCTACAACGGCACCATGTTCCCCGAACGCTATCGCAACC
AGATCTTCATCGCCGAACACGGCTCCTGGAACCGGAGCGAACGGATCGGCTACCGCGTCGTCCTGGTGCGCCTCGAAGGG
AACCGCGCCGTCTCCTACGAGCCCTTTGCCGAGGGATGGCTTGACAACGACAAGGTCTGGGGCCGGCCCGTTGATGTGCA
GGTAATGCCCGACGGCAGCCTGCTCGTTTCCGACGACAAGGCCGGGGCCATCTACCGCATCAGCTACCGGCAACAGCCGC
TGGCCCATGGCGCGCAGTGA

Upstream 100 bases:

>100_bases
GGAAGGATAACAAGGACGGGGCATCAGTCAACGAAGCCTTGCGCATCGTCCCGCCGTGGTACACTTGAGGGACACGAACA
AGCTGTCGCGGGAGGTTTCC

Downstream 100 bases:

>100_bases
GTGCATCTCCTGCATACTTAGCCCCCCTGCGAAGGGATCACCCGCTTGGGGCCGTTGCAGCCGATCTTTGCCACGTTGCA
CGAGCCGCAGGATCAAACCG

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MHPIKTLRFLLAHLFLLAAATGCNAARTLPAAITLPPGFSIAVYADNVPGARSMALGAKGTLFVGSRGEGKVYALADRNS
DQVADEVITIAKGLQMPNGVAFRNGSLYVAEVSRVLRYDAIEERLKNPPPPVVVNDSFPDRTHHGWKFIRFGPDGRLYVP
VGAPCNVCEEKDPRFATIMRMNPDGTGLEIFANGVRNTVGFDWHPRTGELWFTDNGRDWLGNDLPPDELNRAPRSGLHFG
FPYRHGRDIPDPEFDAKRKPDQLVAPEMELGPHVAALGMRFYNGTMFPERYRNQIFIAEHGSWNRSERIGYRVVLVRLEG
NRAVSYEPFAEGWLDNDKVWGRPVDVQVMPDGSLLVSDDKAGAIYRISYRQQPLAHGAQ

Sequences:

>Translated_379_residues
MHPIKTLRFLLAHLFLLAAATGCNAARTLPAAITLPPGFSIAVYADNVPGARSMALGAKGTLFVGSRGEGKVYALADRNS
DQVADEVITIAKGLQMPNGVAFRNGSLYVAEVSRVLRYDAIEERLKNPPPPVVVNDSFPDRTHHGWKFIRFGPDGRLYVP
VGAPCNVCEEKDPRFATIMRMNPDGTGLEIFANGVRNTVGFDWHPRTGELWFTDNGRDWLGNDLPPDELNRAPRSGLHFG
FPYRHGRDIPDPEFDAKRKPDQLVAPEMELGPHVAALGMRFYNGTMFPERYRNQIFIAEHGSWNRSERIGYRVVLVRLEG
NRAVSYEPFAEGWLDNDKVWGRPVDVQVMPDGSLLVSDDKAGAIYRISYRQQPLAHGAQ
>Mature_379_residues
MHPIKTLRFLLAHLFLLAAATGCNAARTLPAAITLPPGFSIAVYADNVPGARSMALGAKGTLFVGSRGEGKVYALADRNS
DQVADEVITIAKGLQMPNGVAFRNGSLYVAEVSRVLRYDAIEERLKNPPPPVVVNDSFPDRTHHGWKFIRFGPDGRLYVP
VGAPCNVCEEKDPRFATIMRMNPDGTGLEIFANGVRNTVGFDWHPRTGELWFTDNGRDWLGNDLPPDELNRAPRSGLHFG
FPYRHGRDIPDPEFDAKRKPDQLVAPEMELGPHVAALGMRFYNGTMFPERYRNQIFIAEHGSWNRSERIGYRVVLVRLEG
NRAVSYEPFAEGWLDNDKVWGRPVDVQVMPDGSLLVSDDKAGAIYRISYRQQPLAHGAQ

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42191; Mature: 42191

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPIKTLRFLLAHLFLLAAATGCNAARTLPAAITLPPGFSIAVYADNVPGARSMALGAKG
CCHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCEEEEEECCCCCCHHEEECCCC
TLFVGSRGEGKVYALADRNSDQVADEVITIAKGLQMPNGVAFRNGSLYVAEVSRVLRYDA
EEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHHHHHH
IEERLKNPPPPVVVNDSFPDRTHHGWKFIRFGPDGRLYVPVGAPCNVCEEKDPRFATIMR
HHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEE
MNPDGTGLEIFANGVRNTVGFDWHPRTGELWFTDNGRDWLGNDLPPDELNRAPRSGLHFG
ECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEC
FPYRHGRDIPDPEFDAKRKPDQLVAPEMELGPHVAALGMRFYNGTMFPERYRNQIFIAEH
CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEC
GSWNRSERIGYRVVLVRLEGNRAVSYEPFAEGWLDNDKVWGRPVDVQVMPDGSLLVSDDK
CCCCCCCCCCEEEEEEEECCCEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEECCC
AGAIYRISYRQQPLAHGAQ
CCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MHPIKTLRFLLAHLFLLAAATGCNAARTLPAAITLPPGFSIAVYADNVPGARSMALGAKG
CCHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCEEEEEECCCCCCHHEEECCCC
TLFVGSRGEGKVYALADRNSDQVADEVITIAKGLQMPNGVAFRNGSLYVAEVSRVLRYDA
EEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHHHHHH
IEERLKNPPPPVVVNDSFPDRTHHGWKFIRFGPDGRLYVPVGAPCNVCEEKDPRFATIMR
HHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEE
MNPDGTGLEIFANGVRNTVGFDWHPRTGELWFTDNGRDWLGNDLPPDELNRAPRSGLHFG
ECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEC
FPYRHGRDIPDPEFDAKRKPDQLVAPEMELGPHVAALGMRFYNGTMFPERYRNQIFIAEH
CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCHHHHHHHHHCCCCCHHHHCCEEEEEEC
GSWNRSERIGYRVVLVRLEGNRAVSYEPFAEGWLDNDKVWGRPVDVQVMPDGSLLVSDDK
CCCCCCCCCCEEEEEEEECCCEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEECCC
AGAIYRISYRQQPLAHGAQ
CCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]