| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is gph [C]
Identifier: 38234253
GI number: 38234253
Start: 1719502
End: 1720146
Strand: Direct
Name: gph [C]
Synonym: DIP1682
Alternate gene names: 38234253
Gene position: 1719502-1720146 (Clockwise)
Preceding gene: 38234247
Following gene: 38234254
Centisome position: 69.09
GC content: 51.78
Gene sequence:
>645_bases GTGGGAACTCTATTAATCGATGTTGACGGGACTGTGGTTGATTCCTATCCCGGCATCCGTGAGGCTTTTATTCACTCGAT GACATCGGTGGGTATTCCGGTTCCGGAGGAATCGTGGCTGCGCCGTATTCCCGGCCCGCCGATGGTAGAAACTATGCGTG CGCTTGGGCAATCCGATTCAGTTACAGCAGCCGCATTGGCATGTTTTAGGCAGCAATACGATCAGATTTCTTGGCGTAAC TCTCAGCTTTTCGACGGCTGGCATGACGCTCTTAGTGAATGGCGCTCTCAAGGTATTCGGTTGTTTACCGCAACGAGTAA AAACGAGCACTTGGCACGGCTTACCCTTGAATACTTAGGTGTTGCCGACTTGTTTGATTTCATTGGTGGCGCAGACCCCA CGGTGGGACGTGAGACTAAGGCAGATGTGATTGCGTACGTTTTAGCTACGACTGAGACTTCTGAGCACTCCCCTATTTTG ATGGTCGGCGATCGTAGTCATGACACCGAGGGTGCTGCAGCTTTTGGGATTCCGACGATGCTGGTCACATGGGGCTACGG TAACGAGCAAGAGTGGTCCCACGCGGATTATCATGCACGTAATATGGCGGAGGCGAAAGGAATCGTACGTGACTTCTTCA ACTAA
Upstream 100 bases:
>100_bases CAACGTTGACGGCAAAGTCGAGGCGGGCCCCAAAGGCATCGTCGTCGCCGTGAATCCTAGAAAGTGACACTGCGTTGATT TTAGTGGGAGACTACTGGGT
Downstream 100 bases:
>100_bases TAACTCCAGTAATCCAGCTTTTGTGATCACTTTTGTATGCACCGGCAATATTTGCCGTTCTCCGATGGCCGAGGTGATCT GCACGAGCGTTTTAGAAGAC
Product: putative phosphoglycolate phosphatase
Products: Glycolate; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGTLLIDVDGTVVDSYPGIREAFIHSMTSVGIPVPEESWLRRIPGPPMVETMRALGQSDSVTAAALACFRQQYDQISWRN SQLFDGWHDALSEWRSQGIRLFTATSKNEHLARLTLEYLGVADLFDFIGGADPTVGRETKADVIAYVLATTETSEHSPIL MVGDRSHDTEGAAAFGIPTMLVTWGYGNEQEWSHADYHARNMAEAKGIVRDFFN
Sequences:
>Translated_214_residues MGTLLIDVDGTVVDSYPGIREAFIHSMTSVGIPVPEESWLRRIPGPPMVETMRALGQSDSVTAAALACFRQQYDQISWRN SQLFDGWHDALSEWRSQGIRLFTATSKNEHLARLTLEYLGVADLFDFIGGADPTVGRETKADVIAYVLATTETSEHSPIL MVGDRSHDTEGAAAFGIPTMLVTWGYGNEQEWSHADYHARNMAEAKGIVRDFFN >Mature_213_residues GTLLIDVDGTVVDSYPGIREAFIHSMTSVGIPVPEESWLRRIPGPPMVETMRALGQSDSVTAAALACFRQQYDQISWRNS QLFDGWHDALSEWRSQGIRLFTATSKNEHLARLTLEYLGVADLFDFIGGADPTVGRETKADVIAYVLATTETSEHSPILM VGDRSHDTEGAAAFGIPTMLVTWGYGNEQEWSHADYHARNMAEAKGIVRDFFN
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 23711; Mature: 23580
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLLIDVDGTVVDSYPGIREAFIHSMTSVGIPVPEESWLRRIPGPPMVETMRALGQSDS CCEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC VTAAALACFRQQYDQISWRNSQLFDGWHDALSEWRSQGIRLFTATSKNEHLARLTLEYLG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH VADLFDFIGGADPTVGRETKADVIAYVLATTETSEHSPILMVGDRSHDTEGAAAFGIPTM HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHCCCEE LVTWGYGNEQEWSHADYHARNMAEAKGIVRDFFN EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTLLIDVDGTVVDSYPGIREAFIHSMTSVGIPVPEESWLRRIPGPPMVETMRALGQSDS CEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC VTAAALACFRQQYDQISWRNSQLFDGWHDALSEWRSQGIRLFTATSKNEHLARLTLEYLG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH VADLFDFIGGADPTVGRETKADVIAYVLATTETSEHSPILMVGDRSHDTEGAAAFGIPTM HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHCCCEE LVTWGYGNEQEWSHADYHARNMAEAKGIVRDFFN EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]