| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234217
Identifier: 38234217
GI number: 38234217
Start: 1677107
End: 1677880
Strand: Direct
Name: 38234217
Synonym: DIP1642
Alternate gene names: NA
Gene position: 1677107-1677880 (Clockwise)
Preceding gene: 38234216
Following gene: 38234219
Centisome position: 67.39
GC content: 55.43
Gene sequence:
>774_bases ATGGCTGACGTGAACAAGCAGGCCGCAAAGGCCGCAAAGAAGGAGCAACGCGCCGCTAAGCGTGCTCAACGTCGCCAGAA CTGGGCACAGATCTGGCAGGCGTTTAATATCCAACGCAAGCAGGATAAAGCGCTGATCCCTATTATGCTTGCTGCCTTCT TGGGCACCGGCTTGGCGTTCTTCCTCATCGGTTTGTTGTGGAACGGCCAGTGGTTCATGCTGGTTACCGGCTTGATCCTC GGCGCTGCATTGGCAATGTTCTTGTTTAGTCGCCGTTTGCAGGCCAGCGTGTACGACCGTGCAGAAGGCCAGGCAGGTGC AGCAGGCTGGGCTTTGGAAAACATGCGCTCCGGTTATGGCATGGCATGGCGCACTAAGACTGGTGTTGCTTTTACCAAGA ACATGGATGTACTTCACCGCACCATTGGCGTGTGCGGCATCGTACTTGTCGGCGAGGGCAACAAATCCCACCTTCGCCCG CTGGTAAGCCAGCAGCGCAAACGCTTGGAGCGTCTCGCACCAGGTGTGCCAGTGCATGAGATCTACATTGGTTCCGGTGA AGGTGAAGTTTCACTGAAAAAGCTTCAGAGCACTTTGATGAAGTTGCCTCGCGTGTACAAGAAGAACGACGTGTACAGCA TCGCTAACCGCATCGAGTCCATGGACAGCATTAATGCCGGTGGCGCTGCGCTTCCCAAGGGGCCAATTCCTAAGGGCGGC AAAATGTCGGGCATGAATCGTCGCGCTCGTCGTTCGGCAGAACGCAATAAGTAA
Upstream 100 bases:
>100_bases CTTCCCAAGACACCCCTGTAGTGTCGTCGAAGGCTTAAGACTGGGGCGTAGCCGGTGGGTTATTTAATGAATCCTGTCTT GCCCCGCTAAGGTGGTATGC
Downstream 100 bases:
>100_bases GAAGATAGAAAAATTCCCACGCACGTGTGCGTGGGAATTTTTGTTGCTATCCAAAAACGACTGCGGTGCCGGTAGCTCGG TCATGCATGCCGCGCCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MADVNKQAAKAAKKEQRAAKRAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAFFLIGLLWNGQWFMLVTGLIL GAALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYGMAWRTKTGVAFTKNMDVLHRTIGVCGIVLVGEGNKSHLRP LVSQQRKRLERLAPGVPVHEIYIGSGEGEVSLKKLQSTLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGG KMSGMNRRARRSAERNK
Sequences:
>Translated_257_residues MADVNKQAAKAAKKEQRAAKRAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAFFLIGLLWNGQWFMLVTGLIL GAALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYGMAWRTKTGVAFTKNMDVLHRTIGVCGIVLVGEGNKSHLRP LVSQQRKRLERLAPGVPVHEIYIGSGEGEVSLKKLQSTLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGG KMSGMNRRARRSAERNK >Mature_256_residues ADVNKQAAKAAKKEQRAAKRAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAFFLIGLLWNGQWFMLVTGLILG AALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYGMAWRTKTGVAFTKNMDVLHRTIGVCGIVLVGEGNKSHLRPL VSQQRKRLERLAPGVPVHEIYIGSGEGEVSLKKLQSTLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGGK MSGMNRRARRSAERNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021315 [H]
Pfam domain/function: PF11139 DUF2910 [H]
EC number: NA
Molecular weight: Translated: 28407; Mature: 28276
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVNKQAAKAAKKEQRAAKRAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH FLIGLLWNGQWFMLVTGLILGAALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC MAWRTKTGVAFTKNMDVLHRTIGVCGIVLVGEGNKSHLRPLVSQQRKRLERLAPGVPVHE CEEECCCCEEECCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IYIGSGEGEVSLKKLQSTLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGG EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KMSGMNRRARRSAERNK CCCCCHHHHHHHHHCCC >Mature Secondary Structure ADVNKQAAKAAKKEQRAAKRAQRRQNWAQIWQAFNIQRKQDKALIPIMLAAFLGTGLAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH FLIGLLWNGQWFMLVTGLILGAALAMFLFSRRLQASVYDRAEGQAGAAGWALENMRSGYG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC MAWRTKTGVAFTKNMDVLHRTIGVCGIVLVGEGNKSHLRPLVSQQRKRLERLAPGVPVHE CEEECCCCEEECCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IYIGSGEGEVSLKKLQSTLMKLPRVYKKNDVYSIANRIESMDSINAGGAALPKGPIPKGG EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KMSGMNRRARRSAERNK CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]