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The map label for this gene is smf [C]

Identifier: 38234090

GI number: 38234090

Start: 1534889

End: 1536040

Strand: Reverse

Name: smf [C]

Synonym: DIP1511

Alternate gene names: 38234090

Gene position: 1536040-1534889 (Counterclockwise)

Preceding gene: 38234091

Following gene: 38234089

Centisome position: 61.72

GC content: 49.91

Gene sequence:

>1152_bases
ATGAGCAGGTTAGAAGCTTGGGCATATTTGTCTCGAGTTTTTGAAGGACCTAGCAGATCACTCCAGAAACTTTTAGAGAC
AGAATCTGATGTAGAAAAAATCGCATGGGGGATCAAAAAGAGAGAAGCGTGGCTTGGGCCTATCTTGTTTGAAACGGCTT
CGCGCTATTCAGTCTCATTGGAACAAGAGGATCTAACTACAATCAAGAATCTCGGTGGCAGGCTTGTCACTCCTGATGAT
GACGAATGGCCACGGGAAAAATTCGAGACAGCATTTGGTTTTGCCGCCTCTGGTACCAGCTCTCTAGTGCGCTCATATCA
ATCCGATGCAGTTGCCCCTCACGCCCTCTGGGTTCGTGGTGCACCGCTATCGACGACTGTTGATCGCAGCGTGGCCATCG
TGGGTACCCGTGCTATGAGCCACTATGGCAAGAGCGCGACTTCAATGTTGGCAGCGGGGATTGCCGATCATCATTGGACG
ATAGTCTCAGGAGGAGCTCTAGGAGTAGACACCGTAGCCCACACCGAAGCTCTGCAACGACAAAAACCCACAGTAGCAGT
ATGCGCACGTGGACTTGATGCACCTTATCCGCGTAAAAACGCAGAACTGCTACGCTCGATCGTTGAAACCGGATGCTTAG
TCAGCGAATACGCGCCGGGATTAACACCACACCGTCACCGTTTTTTGACCCGCAATCGGTTAGTAGCTGCATTATCTCAA
GGAACCGTAGTAGTTGAAGCTGCATGGCGCTCCGGTGCACTTAACACGCTTAGTTGGGCAAGTGCTTTAGGAAGAGTAGC
AATGGCCGTGCCTGGCCCAGTAACGAACACTGGTTCATTAGGTTGCCATGAACGCATTAGAAATAAAGAGGCCGAATTGG
TGTGTAGCGCTGAGGAAATTCTTGCTTTGGTAGGAACCTTGGGCGAGTTTGACCCCAATGGGCAATATGAATTGCAGTTT
GCAGCCGATCCGATTCAAAGTCTAAGCAGAAATGAAATGAGAGTTTTTGATTCGTTGGATGCAAATCCTCACACCACTGA
CACGGTTGCGGCGGCTGCTGGTATTCCGATTGGGCTTTGCGTTCATATTCTGCGTGATCTAGAAAAGAAACAACTCGTTA
TGCGGGAGGGGGCCCACTGGCATAGATGTTAA

Upstream 100 bases:

>100_bases
CATGGACATTGTGTGATTTGGAAGGAAAAACACGTCCTGACTTAGGCCACACAGCGTATGCACTTGAGCTACGCGATGAT
TGTATTAGGGAGAATGCCGC

Downstream 100 bases:

>100_bases
AACTTTTTATCGGTAGCCTCTTGCGTGATGAACAATCATGCCTTAATGTAACAAAGGCAAGCCTAAGTAAAGCTTTTTGA
GGTTCGGGCTGGTTCCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWLGPILFETASRYSVSLEQEDLTTIKNLGGRLVTPDD
DEWPREKFETAFGFAASGTSSLVRSYQSDAVAPHALWVRGAPLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWT
IVSGGALGVDTVAHTEALQRQKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLTPHRHRFLTRNRLVAALSQ
GTVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLGCHERIRNKEAELVCSAEEILALVGTLGEFDPNGQYELQF
AADPIQSLSRNEMRVFDSLDANPHTTDTVAAAAGIPIGLCVHILRDLEKKQLVMREGAHWHRC

Sequences:

>Translated_383_residues
MSRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWLGPILFETASRYSVSLEQEDLTTIKNLGGRLVTPDD
DEWPREKFETAFGFAASGTSSLVRSYQSDAVAPHALWVRGAPLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWT
IVSGGALGVDTVAHTEALQRQKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLTPHRHRFLTRNRLVAALSQ
GTVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLGCHERIRNKEAELVCSAEEILALVGTLGEFDPNGQYELQF
AADPIQSLSRNEMRVFDSLDANPHTTDTVAAAAGIPIGLCVHILRDLEKKQLVMREGAHWHRC
>Mature_382_residues
SRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWLGPILFETASRYSVSLEQEDLTTIKNLGGRLVTPDDD
EWPREKFETAFGFAASGTSSLVRSYQSDAVAPHALWVRGAPLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWTI
VSGGALGVDTVAHTEALQRQKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLTPHRHRFLTRNRLVAALSQG
TVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLGCHERIRNKEAELVCSAEEILALVGTLGEFDPNGQYELQFA
ADPIQSLSRNEMRVFDSLDANPHTTDTVAAAAGIPIGLCVHILRDLEKKQLVMREGAHWHRC

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=304, Percent_Identity=35.8552631578947, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41661; Mature: 41529

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWLGPILFETASRYSVSL
CCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEC
EQEDLTTIKNLGGRLVTPDDDEWPREKFETAFGFAASGTSSLVRSYQSDAVAPHALWVRG
CHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEC
APLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWTIVSGGALGVDTVAHTEALQR
CCCCCHHCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
QKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLTPHRHRFLTRNRLVAALSQ
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GTVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLGCHERIRNKEAELVCSAEEI
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHEEECHHHH
LALVGTLGEFDPNGQYELQFAADPIQSLSRNEMRVFDSLDANPHTTDTVAAAAGIPIGLC
HHHHHHHHCCCCCCCEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCHHHHH
VHILRDLEKKQLVMREGAHWHRC
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWLGPILFETASRYSVSL
CHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEC
EQEDLTTIKNLGGRLVTPDDDEWPREKFETAFGFAASGTSSLVRSYQSDAVAPHALWVRG
CHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEC
APLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWTIVSGGALGVDTVAHTEALQR
CCCCCHHCCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
QKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLTPHRHRFLTRNRLVAALSQ
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GTVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLGCHERIRNKEAELVCSAEEI
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHEEECHHHH
LALVGTLGEFDPNGQYELQFAADPIQSLSRNEMRVFDSLDANPHTTDTVAAAAGIPIGLC
HHHHHHHHCCCCCCCEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCHHHHH
VHILRDLEKKQLVMREGAHWHRC
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]