| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is entD [C]
Identifier: 38234053
GI number: 38234053
Start: 1492097
End: 1492789
Strand: Reverse
Name: entD [C]
Synonym: DIP1472
Alternate gene names: 38234053
Gene position: 1492789-1492097 (Counterclockwise)
Preceding gene: 38234054
Following gene: 38234051
Centisome position: 59.98
GC content: 47.76
Gene sequence:
>693_bases ATGATAGCAGGTAATAATAGCGAGTATGCCCTGGATTCGAGGTTGTTCCCGCAATCAGCTCGTAGTACTGCATTATTGGT TCCAAGGCATACACCGGATTTATCAAATTTTAATAGACTGCATGTTTTAGAAAAAGCACAGGTGAAAAATGCGGTTGCCG TTCGCCGTGCTGAGTTTGGTGACGCACGTTGGTGTGCACACCAAAGTTTGCGCAAGTTGGGGCTATATGATCATCCGGCA ATTTTACGCGGTGAACGGGGTATGCCTTTGTGGCCGGTTGGCATTGCTGGATCTTTAACGCATACGGAGGGTTTGAGGGC GGCTGTTGTTGCACCGACTACTGAAGTAGCTTCTATGGGCATTGATGCAGAGATCGCTGAGGAGTTGCCTGGCGGTATTT TGGGTTCAATTGCGCGGCCCAATGAAATCGCCATGTTGGATGATCTGCGTGCTAGAGGTTTATTATTCGCTGATCGGTTG TTGTTTTGTGCCAAAGAAGCCACCTATAAGGCTTGGTTCCCGATTACTCAACGATGGCTGGATTTTGATCAGGCAGAAAT TGATATTAGGGCCGATGGCACGTTTATTTCTTATTTGCTCATTCGGCCCACCCCGTTTCCTTTTATCGAAGGAAAGTGGG CAATACATGATGGCTATGTCGTAGCAACCACTGTCATCCCCGCGATGGGTTAA
Upstream 100 bases:
>100_bases TTCGTCACGTAGAAGTCTCGCTTGGCTACCCGCATCAATGGTCACAAAATATCGAAGATCGTTCGTGGCCGTTTCCCGTC ATGACCTCGGAGGTGGTGGC
Downstream 100 bases:
>100_bases AGGGTCGATGGACGTGCCACAAATATGGTGGCTAGCCGTTTGCCTTGTTCTTTTACCAAGGCGATAGCACGTCCATGAGG ATCGACCGCTGCATGGATTC
Product: putative transferase
Products: pyrophosphate; AMP; enterobactin; aryl carrier protein/isochorismatase; 3',5'-ADP; serine activating enzyme + [C]
Alternate protein names: Phosphopantetheinyl Transferase; Phosphopantetheinyl Transferase PptA; Sfp-Type Phosphopantetheinyl Transferase; 4-Phosphopantetheinyl Tranferase; Siderophore Biosynthesis Protein; Holo-[Acyl-Carrier-Protein] Synthase; EntD Family Protein; Phosphopantetheinyl Transferase PptII; 4-Phosphopantetheinyl Transferase Family Protein; Transferase; 4-Phosphopantetheinyl Transferase EntD; 4-Phosphopantetheinyl Transferase Superfamily; Vibriobactin Synthase Component D; 4-Phosphopantetheinyl Transferase Protein
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEKAQVKNAVAVRRAEFGDARWCAHQSLRKLGLYDHPA ILRGERGMPLWPVGIAGSLTHTEGLRAAVVAPTTEVASMGIDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRL LFCAKEATYKAWFPITQRWLDFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVATTVIPAMG
Sequences:
>Translated_230_residues MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEKAQVKNAVAVRRAEFGDARWCAHQSLRKLGLYDHPA ILRGERGMPLWPVGIAGSLTHTEGLRAAVVAPTTEVASMGIDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRL LFCAKEATYKAWFPITQRWLDFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVATTVIPAMG >Mature_230_residues MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEKAQVKNAVAVRRAEFGDARWCAHQSLRKLGLYDHPA ILRGERGMPLWPVGIAGSLTHTEGLRAAVVAPTTEVASMGIDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRL LFCAKEATYKAWFPITQRWLDFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVATTVIPAMG
Specific function: Catalyzes The Transfer Of The 4'-Phosphopantetheine Moiety From Coenzyme A To Apo-Domains Of Both Entb (An Arcp Domain) And Entf (A Pcp Domain). Plays An Essential Role In The Assembly Of The Enterobactin. [C]
COG id: COG2977
COG function: function code Q; Phosphopantetheinyl transferase component of siderophore synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.- [C]
Molecular weight: Translated: 25377; Mature: 25377
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEKAQVKNAVAVRRAEFG CCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC DARWCAHQSLRKLGLYDHPAILRGERGMPLWPVGIAGSLTHTEGLRAAVVAPTTEVASMG CHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCHHHHHCC IDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRLLFCAKEATYKAWFPITQRWL CCHHHHHHCCCCHHHCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHC DFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVATTVIPAMG CCCCCEEEEEECCEEEEEEEECCCCCCEECCEEEEECCEEEEEEECCCCC >Mature Secondary Structure MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEKAQVKNAVAVRRAEFG CCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC DARWCAHQSLRKLGLYDHPAILRGERGMPLWPVGIAGSLTHTEGLRAAVVAPTTEVASMG CHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCHHHHHCC IDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRLLFCAKEATYKAWFPITQRWL CCHHHHHHCCCCHHHCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHC DFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVATTVIPAMG CCCCCEEEEEECCEEEEEEEECCCCCCEECCEEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate; Coenzyme A; apo-EntB; apo-serine activating enzyme [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin Coenzyme A + apo-EntB = aryl carrier protein/isochorismatase + 3',5'-ADP Coenzyme A + apo-serine activating enzyme = 3',5'-ADP + serine activating enzyme [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA