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The map label for this gene is 38234037

Identifier: 38234037

GI number: 38234037

Start: 1474405

End: 1474734

Strand: Reverse

Name: 38234037

Synonym: DIP1456

Alternate gene names: NA

Gene position: 1474734-1474405 (Counterclockwise)

Preceding gene: 38234038

Following gene: 38234036

Centisome position: 59.26

GC content: 50.0

Gene sequence:

>330_bases
ATGATGAAATACACTGCGGTACTTGACAAGCCTGTGACAGGAAACGAAACAACCGGATCTTTACCGGAACCCTTGCTTCG
TGAGGCTCTAGGTGCTGCTCTGCGTGCTTTTAGAGCAGACAAAGGGATTACACTTCGTGAACTGGCAGAAACTTCACGTG
TGTCTCCTGGCTATCTGTCGGAGTTAGAACGTGGGCGTAAAGAGGTTTCTTCGGAACTCCTTGCCTCTGTATGTCATGCG
CTTGGCACCTCAGTTTCTGATGTCCTCATTGAAGCTGCTGGCACCATGGCAATGCGCTCAGCTGAAGCCGATCTAGTTAG
AGTGTCTTAG

Upstream 100 bases:

>100_bases
AATGAAAATTGAGCTTATAAGACTCAATGATTCCGTGGCATGATGTGTACATTGATTAATGTTGGGAACAAACTAGACAC
GATCGGCGTTTGACTATTTG

Downstream 100 bases:

>100_bases
TGGCTGTTACCGACTGCGCTACTATAGCTTTGCGTGGTTTTCACAAGATTTATAAAAAGTTTCATCACTAATTGATGTGC
TGCAGTCTTCAATATGTGCA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator ClgR; Helix-Turn-Helix Domain-Containing Protein; HTH_3 Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITLRELAETSRVSPGYLSELERGRKEVSSELLASVCHA
LGTSVSDVLIEAAGTMAMRSAEADLVRVS

Sequences:

>Translated_109_residues
MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITLRELAETSRVSPGYLSELERGRKEVSSELLASVCHA
LGTSVSDVLIEAAGTMAMRSAEADLVRVS
>Mature_109_residues
MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITLRELAETSRVSPGYLSELERGRKEVSSELLASVCHA
LGTSVSDVLIEAAGTMAMRSAEADLVRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11592; Mature: 11592

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITLRELAETSRVSPGYLS
CCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
ELERGRKEVSSELLASVCHALGTSVSDVLIEAAGTMAMRSAEADLVRVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITLRELAETSRVSPGYLS
CCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
ELERGRKEVSSELLASVCHALGTSVSDVLIEAAGTMAMRSAEADLVRVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA